Ruminococcus sp. AM12-48

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM12-48 is a Gram-positive bacterium characterized by its cocci shape. This species is notable for the presence of flagella, which contributes to its motility. It possesses a single replicon, indicating a streamlined genomic organization that can facilitate efficient replication and adaptation within its ecological niche. The accession number for Ruminococcus sp. AM12-48 is QUDA00000000.1, providing a reference for genomic and taxonomic data. This species is part of the Ruminococcus genus, which is known for its role in the fermentation of complex carbohydrates in the gastrointestinal tract of various animals, particularly herbivores. The presence of flagella suggests that Ruminococcus sp. AM12-48 may have the ability to navigate its environment, which could be advantageous for colonization in the digestive systems where it may play a role in breaking down plant materials. The ecological significance of Ruminococcus species often lies in their contributions to the gut microbiome, where they assist in the digestion of fibrous substrates, thereby supporting the host's nutrient absorption and overall health. In summary, Ruminococcus sp. AM12-48 exhibits key traits such as being Gram-positive, cocci-shaped, and motile, with a single replicon. These characteristics may enhance its functionality in the complex ecosystem of the gut, highlighting its potential importance in microbial fermentation processes.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM12-48
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM12-48
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM12-48 AM12-48.Scaf87, whole genome shotgun

Gene Summary

Adenine Count

1211207 bp

Thymine Count

1230666 bp

Guanine Count

840806 bp

Cytosine Count

865624 bp

Genome Length

4148882 bp

Protein-coding Genes

3662 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabDW141_12340Not AvailablePositive2642427 - 264388455629.8
mate family efflux transporterDW141_12345Not AvailablePositive2643996 - 264531547827.9
csor family transcriptional regulatorDW141_12350Not AvailablePositive2645821 - 264613811830.5
heavy metal translocating p-type atpaseDW141_12355Not AvailablePositive2646255 - 264890994183.5
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhDW141_12360Not AvailablePositive2648929 - 264998440015.9
sigma-70 family rna polymerase sigma factorDW141_12365Not AvailablePositive2650277 - 265090924579.8
duf4179 domain-containing proteinDW141_12370Not AvailablePositive2650896 - 265126413232.3
histidine kinaseDW141_12375Not AvailablePositive2651248 - 265187423561.2
prsw family intramembrane metalloproteaseDW141_12380Not AvailablePositive2651871 - 265249422793.6
hypothetical proteinDW141_12385Not AvailablePositive2652639 - 265296812329.4

Displaying genes 2371 – 2380 of 3712 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.