Roseburia sp. AM16-25

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AM16-25 is a rod-shaped bacterium characterized by the presence of flagella, which suggests potential motility. This feature may facilitate its movement within the gastrointestinal tract, where it likely resides and interacts with the host's microbiota. The organism has a single replicon, indicating a streamlined genomic structure that is typical for some bacteria, potentially influencing its replication and metabolic processes. The accession number for Roseburia sp. AM16-25 is QUCW00000000.1, which provides a reference point for its genetic information and can aid in further research and identification within microbial databases. In terms of ecological significance, members of the Roseburia genus are known to be important in the human gut microbiome, where they are associated with the fermentation of dietary fibers and the production of short-chain fatty acids. These metabolites are crucial for maintaining gut health, modulating immune responses, and providing energy to colonic epithelial cells. The presence of Roseburia sp. AM16-25 in the gut could contribute positively to the host’s health, particularly in the context of a high-fiber diet, underscoring the importance of this bacterium in the complex interplay of gut microbiota and host nutrition.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AM16-25
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AM16-25 AM16-25.Scaf15, whole genome shotgun

Gene Summary

Adenine Count

724198 bp

Thymine Count

727051 bp

Guanine Count

592074 bp

Cytosine Count

592473 bp

Genome Length

2635846 bp

Protein-coding Genes

2358 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporterDW183_12180Not AvailableNegative2588583 - 258996249733.0
hypothetical proteinDW183_12185Not AvailableNegative2589959 - 259234688140.1
arac family transcriptional regulatorDW183_12190Not AvailablePositive2592476 - 259328231123.9
duf4432 family proteinDW183_12195Not AvailableNegative2593320 - 259428236469.4
carbohydrate kinaseDW183_12200Not AvailableNegative2594315 - 259583256166.0
hypothetical proteinDW183_12205Not AvailableNegative2595856 - 259726252339.9
class ii fructose-bisphosphate aldolaseDW183_12210Not AvailableNegative2597306 - 259817231504.8
helix-turn-helix domain-containing proteinDW183_12215Not AvailablePositive2598286 - 259915833725.6
hypothetical proteinDW183_12225Not AvailableNegative2600277 - 26005159047.68
Tmrna,resume consensus sequence (at 80): attaaacgctgaagataaNot AvailableNot AvailablePositive2600684 - 2601027Not Available

Displaying genes 2371 – 2380 of 2408 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.