Roseburia sp. AM16-25

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AM16-25 is a rod-shaped bacterium characterized by the presence of flagella, which suggests potential motility. This feature may facilitate its movement within the gastrointestinal tract, where it likely resides and interacts with the host's microbiota. The organism has a single replicon, indicating a streamlined genomic structure that is typical for some bacteria, potentially influencing its replication and metabolic processes. The accession number for Roseburia sp. AM16-25 is QUCW00000000.1, which provides a reference point for its genetic information and can aid in further research and identification within microbial databases. In terms of ecological significance, members of the Roseburia genus are known to be important in the human gut microbiome, where they are associated with the fermentation of dietary fibers and the production of short-chain fatty acids. These metabolites are crucial for maintaining gut health, modulating immune responses, and providing energy to colonic epithelial cells. The presence of Roseburia sp. AM16-25 in the gut could contribute positively to the host’s health, particularly in the context of a high-fiber diet, underscoring the importance of this bacterium in the complex interplay of gut microbiota and host nutrition.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AM16-25
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AM16-25 AM16-25.Scaf15, whole genome shotgun

Gene Summary

Adenine Count

724198 bp

Thymine Count

727051 bp

Guanine Count

592074 bp

Cytosine Count

592473 bp

Genome Length

2635846 bp

Protein-coding Genes

2358 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type ii crispr-associated endonuclease cas1DW183_09595Not AvailablePositive2018664 - 201953633121.2
crispr-associated endonuclease cas2DW183_09600Not AvailablePositive2019576 - 201988111882.8
type ii-a crispr-associated protein csn2DW183_09605Not AvailablePositive2019878 - 202054625485.7
acetyl-coa c-acetyltransferaseDW183_09610Not AvailablePositive2023124 - 202431141074.2
3-hydroxybutyryl-coa dehydrogenaseDW183_09615Not AvailablePositive2024347 - 202521931149.1
acyl-coa dehydrogenaseDW183_09620Not AvailablePositive2025300 - 202645441818.5
electron transfer flavoprotein subunit beta/fixa family proteinDW183_09625Not AvailablePositive2026475 - 202725728024.8
electron transfer flavoprotein subunit alpha/fixb family proteinDW183_09630Not AvailablePositive2027282 - 202832536999.5
s-methyl-5-thioribose-1-phosphate isomeraseDW183_09635Not AvailablePositive2028510 - 202958939338.3
atp-binding proteinDW183_09640Not AvailablePositive2029609 - 203045429989.1

Displaying genes 1881 – 1890 of 2408 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.