Roseburia sp. AM16-25

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AM16-25 is a rod-shaped bacterium characterized by the presence of flagella, which suggests potential motility. This feature may facilitate its movement within the gastrointestinal tract, where it likely resides and interacts with the host's microbiota. The organism has a single replicon, indicating a streamlined genomic structure that is typical for some bacteria, potentially influencing its replication and metabolic processes. The accession number for Roseburia sp. AM16-25 is QUCW00000000.1, which provides a reference point for its genetic information and can aid in further research and identification within microbial databases. In terms of ecological significance, members of the Roseburia genus are known to be important in the human gut microbiome, where they are associated with the fermentation of dietary fibers and the production of short-chain fatty acids. These metabolites are crucial for maintaining gut health, modulating immune responses, and providing energy to colonic epithelial cells. The presence of Roseburia sp. AM16-25 in the gut could contribute positively to the host’s health, particularly in the context of a high-fiber diet, underscoring the importance of this bacterium in the complex interplay of gut microbiota and host nutrition.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AM16-25
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AM16-25 AM16-25.Scaf15, whole genome shotgun

Gene Summary

Adenine Count

724198 bp

Thymine Count

727051 bp

Guanine Count

592074 bp

Cytosine Count

592473 bp

Genome Length

2635846 bp

Protein-coding Genes

2358 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glutamate racemaseDW183_08145Not AvailablePositive1660672 - 166144828818.0
cation:proton antiporterDW183_08150Not AvailablePositive1661607 - 166280942926.4
alpha/beta hydrolaseDW183_08155Not AvailablePositive1663027 - 166394134138.8
tetr/acrr family transcriptional regulatorDW183_08160Not AvailableNegative1663938 - 166456724520.3
glycerol-3-phosphate responsive antiterminatorDW183_08165Not AvailableNegative1664588 - 166515420724.3
rlua family pseudouridine synthaseDW183_08170Not AvailableNegative1665221 - 166612934373.6
mate family efflux transporterDW183_08175Not AvailableNegative1666134 - 166749848853.9
duf1667 domain-containing proteinDW183_08180Not AvailableNegative1667700 - 166806512858.8
fad-binding proteinDW183_08185Not AvailableNegative1668068 - 166932745445.2
fad/nad(p)-binding oxidoreductaseDW183_08190Not AvailableNegative1669342 - 167077551464.8

Displaying genes 1591 – 1600 of 2408 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.