Roseburia sp. AM16-25

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AM16-25 is a rod-shaped bacterium characterized by the presence of flagella, which suggests potential motility. This feature may facilitate its movement within the gastrointestinal tract, where it likely resides and interacts with the host's microbiota. The organism has a single replicon, indicating a streamlined genomic structure that is typical for some bacteria, potentially influencing its replication and metabolic processes. The accession number for Roseburia sp. AM16-25 is QUCW00000000.1, which provides a reference point for its genetic information and can aid in further research and identification within microbial databases. In terms of ecological significance, members of the Roseburia genus are known to be important in the human gut microbiome, where they are associated with the fermentation of dietary fibers and the production of short-chain fatty acids. These metabolites are crucial for maintaining gut health, modulating immune responses, and providing energy to colonic epithelial cells. The presence of Roseburia sp. AM16-25 in the gut could contribute positively to the host’s health, particularly in the context of a high-fiber diet, underscoring the importance of this bacterium in the complex interplay of gut microbiota and host nutrition.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AM16-25
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AM16-25 AM16-25.Scaf15, whole genome shotgun

Gene Summary

Adenine Count

724198 bp

Thymine Count

727051 bp

Guanine Count

592074 bp

Cytosine Count

592473 bp

Genome Length

2635846 bp

Protein-coding Genes

2358 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fad:protein fmn transferaseDW183_06435Not AvailableNegative1286898 - 128793537429.0
glutamate 5-kinaseDW183_06440Not AvailablePositive1288049 - 128889430992.5
duf896 domain-containing proteinDW183_06445Not AvailablePositive1288894 - 12891128359.84
5-formyltetrahydrofolate cyclo-ligaseDW183_06450Not AvailablePositive1289048 - 128968023986.0
glutamate-5-semialdehyde dehydrogenaseDW183_06455Not AvailablePositive1289677 - 129092445274.6
trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miabDW183_06460Not AvailablePositive1290905 - 129238356373.0
nusg domain ii-containing proteinDW183_06465Not AvailablePositive1292383 - 129276314027.8
heptaprenyl diphosphate synthaseDW183_06470Not AvailablePositive1292772 - 129326318096.3
holliday junction branch migration protein ruvaDW183_06475Not AvailablePositive1293274 - 129387621571.2
holliday junction branch migration dna helicase ruvbDW183_06480Not AvailablePositive1293886 - 129487836555.1

Displaying genes 1251 – 1260 of 2408 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.