Roseburia sp. AM16-25

Rod

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Roseburia

Description

Roseburia sp. AM16-25 is a rod-shaped bacterium characterized by the presence of flagella, which suggests potential motility. This feature may facilitate its movement within the gastrointestinal tract, where it likely resides and interacts with the host's microbiota. The organism has a single replicon, indicating a streamlined genomic structure that is typical for some bacteria, potentially influencing its replication and metabolic processes. The accession number for Roseburia sp. AM16-25 is QUCW00000000.1, which provides a reference point for its genetic information and can aid in further research and identification within microbial databases. In terms of ecological significance, members of the Roseburia genus are known to be important in the human gut microbiome, where they are associated with the fermentation of dietary fibers and the production of short-chain fatty acids. These metabolites are crucial for maintaining gut health, modulating immune responses, and providing energy to colonic epithelial cells. The presence of Roseburia sp. AM16-25 in the gut could contribute positively to the host’s health, particularly in the context of a high-fiber diet, underscoring the importance of this bacterium in the complex interplay of gut microbiota and host nutrition.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusRoseburia
SpeciesRoseburia sp. AM16-25
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Roseburia sp. AM16-25 AM16-25.Scaf15, whole genome shotgun

Gene Summary

Adenine Count

724198 bp

Thymine Count

727051 bp

Guanine Count

592074 bp

Cytosine Count

592473 bp

Genome Length

2635846 bp

Protein-coding Genes

2358 genes

Non-Coding Genes

50 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding proteinDW183_05105Not AvailablePositive1024964 - 10251526991.53
dna-binding response regulatorDW183_05110Not AvailablePositive1025145 - 102583125730.6
sensor histidine kinaseDW183_05115Not AvailablePositive1025840 - 102687738739.8
abc transporter atp-binding proteinDW183_05120Not AvailablePositive1026987 - 102767025254.6
abc transporter permeaseDW183_05125Not AvailablePositive1027667 - 102947565327.4
sigma-70 family rna polymerase sigma factorDW183_05130Not AvailablePositive1029941 - 103035415950.9
rna polymerase subunit sigma-24DW183_05135Not AvailablePositive1030458 - 103091017909.3
sigma-70 family rna polymerase sigma factorDW183_05140Not AvailablePositive1030921 - 103138217976.7
duf3847 domain-containing proteinDW183_05145Not AvailablePositive1031411 - 103170110962.3
conjugal transfer protein traaDW183_05150Not AvailablePositive1031888 - 103333355070.5

Displaying genes 991 – 1000 of 2408 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.