Clostridium sp. AM22-16AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM22-16AC is characterized by having a single replicon, indicating a streamlined genomic structure typical of some anaerobic bacteria within the Clostridium genus. The genomic data for this strain is available under the accession QUCL00000000.1. Clostridium species are known for their diverse metabolic capabilities, often thriving in anaerobic environments. The presence of only one replicon suggests a potential for efficient replication and regulation of genetic material, which may influence its adaptability and survival in various ecological niches. While specific metabolic pathways and ecological roles of Clostridium sp. AM22-16AC are not detailed in the provided information, Clostridium species are typically involved in the degradation of organic matter and play essential roles in nutrient cycling within their environments. Understanding the genomic organization of this strain can provide valuable insights into its ecological interactions and potential applications in biotechnology, particularly in waste treatment or bioprocessing, where anaerobic bacteria are often utilized for their ability to break down complex organic substances.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM22-16AC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM22-16AC AM22-16AC.Scaf70, whole genome shotgun

Gene Summary

Adenine Count

912083 bp

Thymine Count

915918 bp

Guanine Count

860828 bp

Cytosine Count

867888 bp

Genome Length

3557444 bp

Protein-coding Genes

3128 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pdz domain-containing proteinDW260_15290Not AvailablePositive3268396 - 327005458814.5
sodium/glutamate symporterDW260_15295Not AvailableNegative3270280 - 327146441858.5
atp-dependent clp protease atp-binding subunit clpxDW260_15305Not AvailablePositive3272255 - 327372153667.0
peptidaseDW260_15310Not AvailableNegative3273768 - 327550163048.4
signal peptidase iiDW260_15315Not AvailablePositive3275763 - 327626918749.2
udp-galactopyranose mutaseDW260_15320Not AvailablePositive3276358 - 327746743143.1
lipopolysaccharide biosynthesis proteinDW260_15325Not AvailablePositive3277502 - 327877346715.1
glycosyltransferase family 2 proteinDW260_15330Not AvailablePositive3278763 - 327968935187.4
dtdp-4-dehydrorhamnose 3,5-epimeraseDW260_15335Not AvailablePositive3280082 - 328065721867.0
abc transporter permeaseDW260_15340Not AvailablePositive3280782 - 328160031672.0

Displaying genes 2951 – 2960 of 3276 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.