Clostridium sp. AM22-16AC

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AM22-16AC is characterized by having a single replicon, indicating a streamlined genomic structure typical of some anaerobic bacteria within the Clostridium genus. The genomic data for this strain is available under the accession QUCL00000000.1. Clostridium species are known for their diverse metabolic capabilities, often thriving in anaerobic environments. The presence of only one replicon suggests a potential for efficient replication and regulation of genetic material, which may influence its adaptability and survival in various ecological niches. While specific metabolic pathways and ecological roles of Clostridium sp. AM22-16AC are not detailed in the provided information, Clostridium species are typically involved in the degradation of organic matter and play essential roles in nutrient cycling within their environments. Understanding the genomic organization of this strain can provide valuable insights into its ecological interactions and potential applications in biotechnology, particularly in waste treatment or bioprocessing, where anaerobic bacteria are often utilized for their ability to break down complex organic substances.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AM22-16AC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AM22-16AC AM22-16AC.Scaf70, whole genome shotgun

Gene Summary

Adenine Count

912083 bp

Thymine Count

915918 bp

Guanine Count

860828 bp

Cytosine Count

867888 bp

Genome Length

3557444 bp

Protein-coding Genes

3128 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
shikimate kinaseDW260_05560Not AvailableNegative1247204 - 124771619193.2
flavin reductase family proteinDW260_05565Not AvailableNegative1247791 - 124858228598.3
putative manganese-dependent inorganic diphosphataseDW260_05570Not AvailableNegative1248609 - 125028561877.5
rok family proteinDW260_05575Not AvailableNegative1250707 - 125164832782.7
transketolaseDW260_05580Not AvailableNegative1251790 - 125377271556.3
hypothetical proteinDW260_05585Not AvailableNegative1253833 - 125523951713.5
peptidoglycan-binding proteinDW260_05590Not AvailableNegative1255374 - 125676250957.5
spore protease yyacDW260_05595Not AvailableNegative1256898 - 125750021837.7
m15 family peptidaseDW260_05600Not AvailableNegative1257622 - 125840728985.5
hypothetical proteinDW260_05605Not AvailableNegative1258669 - 125976941605.1

Displaying genes 1211 – 1220 of 3276 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.