Pseudodesulfovibrio sp. S3

curved/spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Pseudodesulfovibrio

Description

Pseudodesulfovibrio sp. S3 is a Gram-negative bacterium characterized by its curved or spiral shape. This organism possesses a single replicon, indicating a streamlined genomic structure. The genome of Pseudodesulfovibrio sp. S3 is cataloged under the accession number QTZO00000000.1, which provides a reference point for further genomic studies and analyses. The Gram-negative nature of Pseudodesulfovibrio sp. S3 suggests that it has a double membrane structure, typical of many bacteria in this category, which can influence its interactions with the environment and its susceptibility to antibiotics. The curved or spiral morphology may confer advantages in motility and colonization within specific ecological niches. In terms of ecological significance, members of the Pseudodesulfovibrio genus are often associated with anaerobic environments, where they may play a role in the sulfur cycle. Their ability to survive in these conditions indicates they could contribute to biogeochemical processes, particularly in sediment and other anoxic habitats. Understanding the characteristics and behaviors of Pseudodesulfovibrio sp. S3 may provide insights into its ecological roles and potential applications in bioremediation or bioenergy production, where sulfur cycling is relevant.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusPseudodesulfovibrio
SpeciesPseudodesulfovibrio sp. S3
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shapecurved/spiral
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudodesulfovibrio sp. S3 NODE_2095_length_405_cov_29.9496, whole

Gene Summary

Adenine Count

785088 bp

Thymine Count

811850 bp

Guanine Count

1058292 bp

Cytosine Count

1023121 bp

Genome Length

3678351 bp

Protein-coding Genes

3354 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sugar abc transporter permeaseDWB63_01540Not AvailableNegative302464 - 30339634857.4
carbohydrate abc transporter substrate-binding proteinDWB63_01545Not AvailableNegative303458 - 30475647365.2
n-acetylmuramic acid 6-phosphate etheraseDWB63_01550Not AvailableNegative304763 - 30568032187.5
n-acetylglucosamine kinaseDWB63_01555Not AvailablePositive305806 - 30668730143.3
sis domain-containing proteinDWB63_01560Not AvailablePositive306690 - 30773336778.7
n-acetylglucosamine-6-phosphate deacetylaseDWB63_01565Not AvailablePositive307733 - 30887540666.0
gfo/idh/moca family oxidoreductaseDWB63_01570Not AvailablePositive308892 - 30996839417.1
hypothetical proteinDWB63_01575Not AvailableNegative310116 - 3104069956.5
hypothetical proteinDWB63_01580Not AvailablePositive310498 - 3107348628.83
nucleoside triphosphate pyrophosphohydrolaseDWB63_01585Not AvailableNegative310915 - 31172130955.5

Displaying genes 371 – 380 of 3448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.