Pseudodesulfovibrio sp. S3

curved/spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Pseudodesulfovibrio

Description

Pseudodesulfovibrio sp. S3 is a Gram-negative bacterium characterized by its curved or spiral shape. This organism possesses a single replicon, indicating a streamlined genomic structure. The genome of Pseudodesulfovibrio sp. S3 is cataloged under the accession number QTZO00000000.1, which provides a reference point for further genomic studies and analyses. The Gram-negative nature of Pseudodesulfovibrio sp. S3 suggests that it has a double membrane structure, typical of many bacteria in this category, which can influence its interactions with the environment and its susceptibility to antibiotics. The curved or spiral morphology may confer advantages in motility and colonization within specific ecological niches. In terms of ecological significance, members of the Pseudodesulfovibrio genus are often associated with anaerobic environments, where they may play a role in the sulfur cycle. Their ability to survive in these conditions indicates they could contribute to biogeochemical processes, particularly in sediment and other anoxic habitats. Understanding the characteristics and behaviors of Pseudodesulfovibrio sp. S3 may provide insights into its ecological roles and potential applications in bioremediation or bioenergy production, where sulfur cycling is relevant.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusPseudodesulfovibrio
SpeciesPseudodesulfovibrio sp. S3
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shapecurved/spiral
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudodesulfovibrio sp. S3 NODE_2095_length_405_cov_29.9496, whole

Gene Summary

Adenine Count

785088 bp

Thymine Count

811850 bp

Guanine Count

1058292 bp

Cytosine Count

1023121 bp

Genome Length

3678351 bp

Protein-coding Genes

3354 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
meta domain-containing proteinDWB63_14600Not AvailableNegative3096730 - 309717315251.6
meta domain-containing proteinDWB63_14605Not AvailableNegative3097179 - 309764016548.9
trpb-like pyridoxal phosphate-dependent enzymeDWB63_14610Not AvailableNegative3097766 - 309911249262.4
nad-dependent deacylaseDWB63_14615Not AvailableNegative3099420 - 310013326145.6
nadp-dependent isocitrate dehydrogenaseDWB63_14620Not AvailablePositive3100317 - 310145940730.0
hyad/hybd family hydrogenase maturation endopeptidaseDWB63_14625Not AvailablePositive3101760 - 310231420274.5
hypc/hybg/hupf family hydrogenase formation chaperoneDWB63_14630Not AvailablePositive3102283 - 31025409422.53
qace family quaternary ammonium compound efflux smr transporterDWB63_14635Not AvailableNegative3102614 - 310294311383.5
hypothetical proteinDWB63_14640Not AvailableNegative3102970 - 310338315822.2
nickel-dependent hydrogenase large subunitDWB63_14645Not AvailableNegative3103926 - 310564462850.3

Displaying genes 2911 – 2920 of 3448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.