Pseudodesulfovibrio sp. S3

curved/spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Pseudodesulfovibrio

Description

Pseudodesulfovibrio sp. S3 is a Gram-negative bacterium characterized by its curved or spiral shape. This organism possesses a single replicon, indicating a streamlined genomic structure. The genome of Pseudodesulfovibrio sp. S3 is cataloged under the accession number QTZO00000000.1, which provides a reference point for further genomic studies and analyses. The Gram-negative nature of Pseudodesulfovibrio sp. S3 suggests that it has a double membrane structure, typical of many bacteria in this category, which can influence its interactions with the environment and its susceptibility to antibiotics. The curved or spiral morphology may confer advantages in motility and colonization within specific ecological niches. In terms of ecological significance, members of the Pseudodesulfovibrio genus are often associated with anaerobic environments, where they may play a role in the sulfur cycle. Their ability to survive in these conditions indicates they could contribute to biogeochemical processes, particularly in sediment and other anoxic habitats. Understanding the characteristics and behaviors of Pseudodesulfovibrio sp. S3 may provide insights into its ecological roles and potential applications in bioremediation or bioenergy production, where sulfur cycling is relevant.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusPseudodesulfovibrio
SpeciesPseudodesulfovibrio sp. S3
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shapecurved/spiral
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudodesulfovibrio sp. S3 NODE_2095_length_405_cov_29.9496, whole

Gene Summary

Adenine Count

785088 bp

Thymine Count

811850 bp

Guanine Count

1058292 bp

Cytosine Count

1023121 bp

Genome Length

3678351 bp

Protein-coding Genes

3354 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ferrous iron transport protein bDWB63_06025Not AvailableNegative1264264 - 126639977002.4
ferrous iron transport protein aDWB63_06030Not AvailableNegative1266403 - 12666458984.07
feob-associated cys-rich membrane proteinDWB63_06035Not AvailableNegative1266702 - 12668846056.51
hypothetical proteinDWB63_06040Not AvailablePositive1267127 - 12673307171.67
hypothetical proteinDWB63_06045Not AvailableNegative1267333 - 126873652519.5
sdr family nad(p)-dependent oxidoreductaseDWB63_06050Not AvailableNegative1268687 - 126949028347.0
acylneuraminate cytidylyltransferase family proteinDWB63_06055Not AvailableNegative1269487 - 127016725139.2
gfo/idh/moca family oxidoreductaseDWB63_06060Not AvailableNegative1270164 - 127107533144.4
cbs domain-containing proteinDWB63_06065Not AvailableNegative1271078 - 127214239765.9
udp-n-acetylglucosamine 2-epimerase (hydrolyzing)DWB63_06070Not AvailableNegative1272148 - 127332942619.4

Displaying genes 1261 – 1270 of 3448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.