Pseudodesulfovibrio sp. S3

curved/spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Pseudodesulfovibrio

Description

Pseudodesulfovibrio sp. S3 is a Gram-negative bacterium characterized by its curved or spiral shape. This organism possesses a single replicon, indicating a streamlined genomic structure. The genome of Pseudodesulfovibrio sp. S3 is cataloged under the accession number QTZO00000000.1, which provides a reference point for further genomic studies and analyses. The Gram-negative nature of Pseudodesulfovibrio sp. S3 suggests that it has a double membrane structure, typical of many bacteria in this category, which can influence its interactions with the environment and its susceptibility to antibiotics. The curved or spiral morphology may confer advantages in motility and colonization within specific ecological niches. In terms of ecological significance, members of the Pseudodesulfovibrio genus are often associated with anaerobic environments, where they may play a role in the sulfur cycle. Their ability to survive in these conditions indicates they could contribute to biogeochemical processes, particularly in sediment and other anoxic habitats. Understanding the characteristics and behaviors of Pseudodesulfovibrio sp. S3 may provide insights into its ecological roles and potential applications in bioremediation or bioenergy production, where sulfur cycling is relevant.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusPseudodesulfovibrio
SpeciesPseudodesulfovibrio sp. S3
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shapecurved/spiral
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudodesulfovibrio sp. S3 NODE_2095_length_405_cov_29.9496, whole

Gene Summary

Adenine Count

785088 bp

Thymine Count

811850 bp

Guanine Count

1058292 bp

Cytosine Count

1023121 bp

Genome Length

3678351 bp

Protein-coding Genes

3354 genes

Non-Coding Genes

94 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein-l-isoaspartate(d-aspartate) o-methyltransferaseDWB63_05325Not AvailableNegative1125370 - 112601123813.2
cbs domain-containing proteinDWB63_05330Not AvailablePositive1126181 - 112661215987.5
m23 family peptidaseDWB63_05335Not AvailablePositive1126775 - 112812749083.8
hypothetical proteinDWB63_05340Not AvailablePositive1128244 - 112878320144.9
endopeptidase laDWB63_05345Not AvailableNegative1128865 - 113132792546.1
atp-dependent clp protease atp-binding subunit clpxDWB63_05350Not AvailableNegative1131439 - 113269246127.8
atp-dependent clp endopeptidase proteolytic subunit clppDWB63_05355Not AvailableNegative1132698 - 113330622345.0
trigger factorDWB63_05360Not AvailableNegative1133579 - 113506955142.4
Trna-leuNot AvailableNot AvailablePositive1135121 - 1135205Not Available
bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinaseDWB63_05370Not AvailableNegative1135277 - 113665648356.6

Displaying genes 1121 – 1130 of 3448 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.