Ruminococcus sp. OM04-4AA

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. OM04-4AA is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism is notable for having a single replicon, which is significant in its genetic structure and replication processes. The accession number for this strain is QTZH00000000.1, which provides a reference for its genetic data. The presence of flagella suggests that Ruminococcus sp. OM04-4AA possesses motility, which may play a role in its ecological interactions within its environment. Ruminococcus species are typically known for their ability to degrade complex carbohydrates, particularly in the digestive systems of herbivores, contributing to the fermentation processes crucial for energy and nutrient absorption. The adaptation of Ruminococcus sp. OM04-4AA to its environment could also have implications for its role in microbial communities, particularly in the rumen of ruminants. These bacteria are essential for breaking down fibrous plant material, which aids in the digestion of cellulose and contributes to the overall health of the host organism. Understanding the traits of Ruminococcus sp. OM04-4AA enhances our knowledge of its potential functions in various ecosystems, particularly in the context of nutrient cycling and energy flow within herbivorous diets.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. OM04-4AA
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. OM04-4AA
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. OM04-4AA OM04-4AA.Scaf181, whole genome shotgun

Gene Summary

Adenine Count

994697 bp

Thymine Count

977627 bp

Guanine Count

681361 bp

Cytosine Count

659456 bp

Genome Length

3313141 bp

Protein-coding Genes

2746 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fe-s cluster assembly scaffold protein nifuDXB52_00330Not AvailablePositive74607 - 7505016209.3
trna 2-thiouridine(34) synthase mnmaDXB52_00335Not AvailablePositive75050 - 7612639839.2
php domain-containing proteinDXB52_00340Not AvailablePositive76123 - 7694431279.9
type i glyceraldehyde-3-phosphate dehydrogenaseDXB52_00345Not AvailablePositive77102 - 7812135888.8
phosphoglycerate kinaseDXB52_00350Not AvailablePositive78292 - 7949142046.4
5'-methylthioadenosine/adenosylhomocysteine nucleosidaseDXB52_00360Not AvailablePositive80577 - 8126924958.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutaseDXB52_00365Not AvailablePositive81427 - 8296555945.4
transcription elongation factor greaDXB52_00370Not AvailablePositive83251 - 8375419460.0
had family hydrolaseDXB52_00375Not AvailablePositive83773 - 8442923870.8
hypothetical proteinDXB52_00380Not AvailablePositive84580 - 848198722.08

Displaying genes 61 – 70 of 2802 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.