Ruminococcus sp. OM04-4AA

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. OM04-4AA is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism is notable for having a single replicon, which is significant in its genetic structure and replication processes. The accession number for this strain is QTZH00000000.1, which provides a reference for its genetic data. The presence of flagella suggests that Ruminococcus sp. OM04-4AA possesses motility, which may play a role in its ecological interactions within its environment. Ruminococcus species are typically known for their ability to degrade complex carbohydrates, particularly in the digestive systems of herbivores, contributing to the fermentation processes crucial for energy and nutrient absorption. The adaptation of Ruminococcus sp. OM04-4AA to its environment could also have implications for its role in microbial communities, particularly in the rumen of ruminants. These bacteria are essential for breaking down fibrous plant material, which aids in the digestion of cellulose and contributes to the overall health of the host organism. Understanding the traits of Ruminococcus sp. OM04-4AA enhances our knowledge of its potential functions in various ecosystems, particularly in the context of nutrient cycling and energy flow within herbivorous diets.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. OM04-4AA
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. OM04-4AA
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. OM04-4AA OM04-4AA.Scaf181, whole genome shotgun

Gene Summary

Adenine Count

994697 bp

Thymine Count

977627 bp

Guanine Count

681361 bp

Cytosine Count

659456 bp

Genome Length

3313141 bp

Protein-coding Genes

2746 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trimethoprim-resistant dihydrofolate reductase dfrfDXB52_06115Not AvailableNegative1314019 - 131449217801.4
xre family transcriptional regulatorDXB52_06120Not AvailableNegative1314887 - 13150425864.37
abc transporter substrate-binding proteinDXB52_06125Not AvailablePositive1315171 - 131624138714.3
hypothetical proteinDXB52_06130Not AvailablePositive1316365 - 131667912260.3
mate family efflux transporterDXB52_06135Not AvailableNegative1316667 - 131803449054.2
atp-binding cassette domain-containing proteinDXB52_06140Not AvailableNegative1318257 - 131931540049.2
molybdate abc transporter permease subunitDXB52_06145Not AvailableNegative1319319 - 132002325745.6
hypothetical proteinDXB52_06150Not AvailableNegative1320499 - 132151539162.3
udp-galactopyranose mutaseDXB52_06155Not AvailableNegative1321674 - 132277443172.1
dihydroorotaseDXB52_06160Not AvailablePositive1322943 - 132421145234.0

Displaying genes 1101 – 1110 of 2802 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.