Ruminococcus sp. OM04-4AA

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. OM04-4AA is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism is notable for having a single replicon, which is significant in its genetic structure and replication processes. The accession number for this strain is QTZH00000000.1, which provides a reference for its genetic data. The presence of flagella suggests that Ruminococcus sp. OM04-4AA possesses motility, which may play a role in its ecological interactions within its environment. Ruminococcus species are typically known for their ability to degrade complex carbohydrates, particularly in the digestive systems of herbivores, contributing to the fermentation processes crucial for energy and nutrient absorption. The adaptation of Ruminococcus sp. OM04-4AA to its environment could also have implications for its role in microbial communities, particularly in the rumen of ruminants. These bacteria are essential for breaking down fibrous plant material, which aids in the digestion of cellulose and contributes to the overall health of the host organism. Understanding the traits of Ruminococcus sp. OM04-4AA enhances our knowledge of its potential functions in various ecosystems, particularly in the context of nutrient cycling and energy flow within herbivorous diets.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. OM04-4AA
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. OM04-4AA
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. OM04-4AA OM04-4AA.Scaf181, whole genome shotgun

Gene Summary

Adenine Count

994697 bp

Thymine Count

977627 bp

Guanine Count

681361 bp

Cytosine Count

659456 bp

Genome Length

3313141 bp

Protein-coding Genes

2746 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioether cross-link-forming sciff peptide maturaseDXB52_05540Not AvailablePositive1183239 - 118463953509.4
protein translocase subunit secdDXB52_05545Not AvailablePositive1184676 - 118708486520.2
single-stranded-dna-specific exonuclease recjDXB52_05550Not AvailablePositive1187187 - 118891164826.0
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseDXB52_05555Not AvailablePositive1189048 - 119135187711.4
mbl fold metallo-hydrolaseDXB52_05560Not AvailablePositive1191380 - 119200022969.5
copg family transcriptional regulatorDXB52_05570Not AvailablePositive1193636 - 11938066590.98
histidine--trna ligaseDXB52_05575Not AvailablePositive1193884 - 119514947684.7
aspartate--trna ligaseDXB52_05580Not AvailablePositive1195176 - 119697867626.2
abc transporter substrate-binding proteinDXB52_05585Not AvailablePositive1197456 - 119847535725.3
abc transporter permeaseDXB52_05590Not AvailablePositive1198502 - 119938931399.6

Displaying genes 1001 – 1010 of 2802 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.