Ruminococcus sp. AM28-29LB

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM28-29LB is a gram-positive bacterium characterized by its cocci shape. This organism possesses flagella, indicating motility, which may play a role in its ecological niche. Ruminococcus species are typically known for their involvement in the fermentation processes within the gastrointestinal tract of ruminants, contributing to the breakdown of complex carbohydrates. The strain AM28-29LB has a single replicon, which is indicative of its genetic organization. Such a feature can be significant in understanding its replication and stability within its environment. The genetic information for this strain is documented under the accession number QTYN00000000.1, providing a reference point for further studies or comparative analyses with other bacterial strains. As a member of the Ruminococcus genus, it is likely that AM28-29LB plays a role in the microbial community associated with ruminant digestion, potentially aiding in the digestion of fibrous plant material. The presence of flagella may enhance its ability to colonize specific niches within the gut and contribute to the overall functionality of the microbiome in ruminants. In summary, Ruminococcus sp. AM28-29LB is a gram-positive, motile cocci with a single replicon, likely playing a significant role in the fermentation processes essential for ruminant digestion. Its traits suggest a specialized adaptation to its ecological role, contributing to the complex interplay of microorganisms in the gastrointestinal tract.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM28-29LB
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM28-29LB
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM28-29LB AM28-29LB.Scaf35, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2098 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thiamine diphosphokinaseDW745_02260Not AvailableNegative463377 - 46402723688.2
ribosome small subunit-dependent gtpase aDW745_02265Not AvailableNegative464009 - 46489633004.3
stk1 family pasta domain-containing ser/thr kinaseDW745_02270Not AvailableNegative464907 - 46702177969.5
stp1/irep family pp2c-type ser/thr phosphataseDW745_02275Not AvailableNegative467031 - 46778027316.8
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnDW745_02280Not AvailableNegative467758 - 46877437792.6
16s rrna (cytosine(967)-c(5))-methyltransferase rsmbDW745_02285Not AvailableNegative468798 - 47013849746.1
peptidaseDW745_02290Not AvailableNegative470157 - 47086126053.1
methionyl-trna formyltransferaseDW745_02295Not AvailableNegative470904 - 47182132958.3
peptide deformylaseDW745_02300Not AvailableNegative471837 - 47231317511.3
dna-directed rna polymerase subunit omegaDW745_02310Not AvailableNegative474766 - 4749727730.22

Displaying genes 481 – 490 of 2177 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.