Ruminococcus sp. AM28-29LB

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM28-29LB is a gram-positive bacterium characterized by its cocci shape. This organism possesses flagella, indicating motility, which may play a role in its ecological niche. Ruminococcus species are typically known for their involvement in the fermentation processes within the gastrointestinal tract of ruminants, contributing to the breakdown of complex carbohydrates. The strain AM28-29LB has a single replicon, which is indicative of its genetic organization. Such a feature can be significant in understanding its replication and stability within its environment. The genetic information for this strain is documented under the accession number QTYN00000000.1, providing a reference point for further studies or comparative analyses with other bacterial strains. As a member of the Ruminococcus genus, it is likely that AM28-29LB plays a role in the microbial community associated with ruminant digestion, potentially aiding in the digestion of fibrous plant material. The presence of flagella may enhance its ability to colonize specific niches within the gut and contribute to the overall functionality of the microbiome in ruminants. In summary, Ruminococcus sp. AM28-29LB is a gram-positive, motile cocci with a single replicon, likely playing a significant role in the fermentation processes essential for ruminant digestion. Its traits suggest a specialized adaptation to its ecological role, contributing to the complex interplay of microorganisms in the gastrointestinal tract.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM28-29LB
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM28-29LB
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM28-29LB AM28-29LB.Scaf35, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2098 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDW745_10570Not AvailablePositive2157637 - 215846730392.5
1-deoxy-d-xylulose-5-phosphate reductoisomeraseDW745_10575Not AvailablePositive2158474 - 215961941636.7
rip metalloprotease rsepDW745_10580Not AvailablePositive2159687 - 216107251066.0
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseDW745_10585Not AvailablePositive2161091 - 216213436865.9
polc-type dna polymerase iiiDW745_10590Not AvailablePositive2162185 - 2166543162303.0
ai-2e family transporterDW745_10595Not AvailablePositive2166556 - 216787549111.6
atp phosphoribosyltransferase regulatory subunitDW745_10600Not AvailablePositive2167973 - 216913943074.4
atp phosphoribosyltransferaseDW745_10605Not AvailablePositive2169164 - 216979323045.1
histidinol dehydrogenaseDW745_10610Not AvailablePositive2169790 - 217108246731.9
histidinol-phosphate transaminaseDW745_10615Not AvailablePositive2171099 - 217215140035.6

Displaying genes 1991 – 2000 of 2177 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.