Ruminococcus sp. AM28-29LB

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM28-29LB is a gram-positive bacterium characterized by its cocci shape. This organism possesses flagella, indicating motility, which may play a role in its ecological niche. Ruminococcus species are typically known for their involvement in the fermentation processes within the gastrointestinal tract of ruminants, contributing to the breakdown of complex carbohydrates. The strain AM28-29LB has a single replicon, which is indicative of its genetic organization. Such a feature can be significant in understanding its replication and stability within its environment. The genetic information for this strain is documented under the accession number QTYN00000000.1, providing a reference point for further studies or comparative analyses with other bacterial strains. As a member of the Ruminococcus genus, it is likely that AM28-29LB plays a role in the microbial community associated with ruminant digestion, potentially aiding in the digestion of fibrous plant material. The presence of flagella may enhance its ability to colonize specific niches within the gut and contribute to the overall functionality of the microbiome in ruminants. In summary, Ruminococcus sp. AM28-29LB is a gram-positive, motile cocci with a single replicon, likely playing a significant role in the fermentation processes essential for ruminant digestion. Its traits suggest a specialized adaptation to its ecological role, contributing to the complex interplay of microorganisms in the gastrointestinal tract.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM28-29LB
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM28-29LB
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM28-29LB AM28-29LB.Scaf35, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

2098 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDW745_10135Not AvailablePositive2065022 - 206559121720.5
polysaccharide deacetylase family proteinDW745_10140Not AvailableNegative2066211 - 206699629105.9
serine o-acetyltransferaseDW745_10150Not AvailableNegative2068500 - 206915323613.6
cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferaseDW745_10155Not AvailableNegative2069191 - 206977521166.8
30s ribosomal protein s12 methylthiotransferase rimoDW745_10160Not AvailableNegative2069829 - 207116950235.3
regulatory protein recxDW745_10165Not AvailableNegative2071172 - 207177723604.1
recombinase recaDW745_10170Not AvailableNegative2071777 - 207289840321.6
peptide chain release factor n(5)-glutamine methyltransferaseDW745_10175Not AvailableNegative2073056 - 207371824186.9
duf1385 domain-containing proteinDW745_10180Not AvailableNegative2073897 - 207488036176.1
sensor histidine kinaseDW745_10185Not AvailableNegative2074922 - 207636152668.1

Displaying genes 1911 – 1920 of 2177 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.