Ruminococcus sp. AM43-6

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM43-6 is a Gram-positive bacterium characterized by its cocci shape. This species has been noted for the presence of flagella, indicating its potential for motility. Ruminococcus sp. AM43-6 is distinct in having a single replicon, which is a characteristic feature of its genomic organization. The genomic data for this bacterium can be referenced under the accession number QTXU00000000.1. The presence of flagella in Ruminococcus sp. AM43-6 may suggest an adaptive advantage in its ecological niche, potentially allowing for movement within complex environments such as the gastrointestinal tracts of herbivorous animals, where it can play a role in the breakdown of fibrous plant materials. This motility could enhance its ability to colonize and thrive in competitive microbial communities. The Gram-positive nature of this microorganism also implies that it has a thick peptidoglycan layer, which may contribute to its resilience and ability to withstand certain environmental stresses. Overall, Ruminococcus sp. AM43-6 exemplifies the diversity of microbial life and its adaptations that enhance survival and functionality in specific ecosystems, particularly in the context of digestive processes in herbivores.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM43-6
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM43-6
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM43-6 AM43-6.Scaf95, whole genome shotgun

Gene Summary

Adenine Count

899178 bp

Thymine Count

904138 bp

Guanine Count

660863 bp

Cytosine Count

663975 bp

Genome Length

3128668 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
had family hydrolaseDW938_11865Not AvailablePositive2568104 - 256892831332.5
mbl fold metallo-hydrolaseDW938_11870Not AvailablePositive2568931 - 256971628133.3
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhDW938_11875Not AvailablePositive2569713 - 257019818120.1
hypothetical proteinDW938_11880Not AvailableNegative2570257 - 257157048112.2
ggdef domain-containing proteinDW938_11885Not AvailableNegative2571745 - 257362571146.0
single-stranded-dna-specific exonuclease recjDW938_11890Not AvailablePositive2574337 - 257637675558.3
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseDW938_11895Not AvailablePositive2576435 - 257876888878.2
mbl fold metallo-hydrolaseDW938_11900Not AvailablePositive2578782 - 257942623793.6
coproporphyrinogen dehydrogenase hemzDW938_11905Not AvailablePositive2579423 - 258088055165.4
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdDW938_11910Not AvailablePositive2580864 - 258221950082.4

Displaying genes 2351 – 2360 of 2865 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.