Ruminococcus sp. AF12-5

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF12-5 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which are essential for motility, enabling it to navigate its environment effectively. Ruminococcus sp. AF12-5 is notable for having a single replicon, which is indicative of its genomic structure. The accession number for Ruminococcus sp. AF12-5 is QTXN00000000.1, providing a reference point for further genomic studies and analysis. The presence of flagella in this organism may suggest an adaptation to its ecological niche, potentially allowing it to thrive in diverse environments, such as the gastrointestinal tracts of ruminants. From a biological perspective, the traits of Ruminococcus sp. AF12-5 highlight its potential role in the microbial community, particularly in relation to digestion and nutrient cycling in ruminants. The ability to move through the gut environment may enhance its capacity to interact with other microbial species and contribute to the overall health and functionality of the host's digestive system. Understanding the characteristics of Ruminococcus sp. AF12-5 can provide insights into its ecological significance and potential applications in microbiome research and livestock management.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF12-5
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF12-5
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF12-5 AF12-5.Scaf23, whole genome shotgun

Gene Summary

Adenine Count

1046027 bp

Thymine Count

956242 bp

Guanine Count

737685 bp

Cytosine Count

610228 bp

Genome Length

3350417 bp

Protein-coding Genes

2956 genes

Non-Coding Genes

132 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional oligoribonuclease/pap phosphatase nrnaDWV75_00995Not AvailablePositive220635 - 22161236291.6
trna pseudouridine(55) synthase trubDWV75_01000Not AvailablePositive221609 - 22253535085.3
bifunctional riboflavin kinase/fad synthetaseDWV75_01005Not AvailablePositive222554 - 22346535186.2
30s ribosomal protein s15DWV75_01010Not AvailablePositive223612 - 22387810095.5
polyribonucleotide nucleotidyltransferaseDWV75_01015Not AvailablePositive224190 - 22627776407.5
stage iii sporulation protein aaDWV75_01020Not AvailablePositive226433 - 22737135194.0
stage iii sporulation protein abDWV75_01025Not AvailablePositive227359 - 22787719939.4
stage iii sporulation protein acDWV75_01030Not AvailablePositive227910 - 2281047045.9
stage iii sporulation protein adDWV75_01035Not AvailablePositive228121 - 22850713969.8
stage iii sporulation protein afDWV75_01040Not AvailablePositive228504 - 22970944367.7

Displaying genes 271 – 280 of 3088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.