Ruminococcus sp. AF12-5

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF12-5 is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which are essential for motility, enabling it to navigate its environment effectively. Ruminococcus sp. AF12-5 is notable for having a single replicon, which is indicative of its genomic structure. The accession number for Ruminococcus sp. AF12-5 is QTXN00000000.1, providing a reference point for further genomic studies and analysis. The presence of flagella in this organism may suggest an adaptation to its ecological niche, potentially allowing it to thrive in diverse environments, such as the gastrointestinal tracts of ruminants. From a biological perspective, the traits of Ruminococcus sp. AF12-5 highlight its potential role in the microbial community, particularly in relation to digestion and nutrient cycling in ruminants. The ability to move through the gut environment may enhance its capacity to interact with other microbial species and contribute to the overall health and functionality of the host's digestive system. Understanding the characteristics of Ruminococcus sp. AF12-5 can provide insights into its ecological significance and potential applications in microbiome research and livestock management.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF12-5
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF12-5
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF12-5 AF12-5.Scaf23, whole genome shotgun

Gene Summary

Adenine Count

1046027 bp

Thymine Count

956242 bp

Guanine Count

737685 bp

Cytosine Count

610228 bp

Genome Length

3350417 bp

Protein-coding Genes

2956 genes

Non-Coding Genes

132 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf1846 domain-containing proteinDWV75_09980Not AvailableNegative2080305 - 208178054180.2
atp-dependent metallopeptidase ftsh/yme1/tma family proteinDWV75_09985Not AvailablePositive2082027 - 208421379848.8
had family hydrolaseDWV75_09990Not AvailablePositive2084571 - 208528427163.8
hypothetical proteinDWV75_09995Not AvailablePositive2085345 - 208675755544.9
duf4194 domain-containing proteinDWV75_10000Not AvailablePositive2086750 - 208744526793.9
hypothetical proteinDWV75_10005Not AvailablePositive2087411 - 2090779130711.0
duf2399 domain-containing proteinDWV75_10010Not AvailablePositive2090772 - 209201947785.6
hypothetical proteinDWV75_10015Not AvailableNegative2092149 - 209249313542.4
hypothetical proteinDWV75_10020Not AvailablePositive2092563 - 209319224940.8
arac family transcriptional regulatorDWV75_10025Not AvailableNegative2093224 - 209441745619.2

Displaying genes 1921 – 1930 of 3088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.