Ruminococcus sp. AF17-6

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF17-6 is a Gram-positive bacterium characterized by its cocci shape. This organism possesses flagella, which suggests potential motility, enabling it to navigate its environment effectively. Ruminococcus sp. AF17-6 has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various ecological niches. The accession number for Ruminococcus sp. AF17-6 is QTWW00000000.1, which serves as a reference for its genomic data. This genomic information could provide insights into the metabolic pathways and ecological roles of the organism within its habitat. Ruminococcus species are often associated with the gastrointestinal tracts of various animals, where they play a vital role in the fermentation of complex carbohydrates. Their presence contributes to the overall health of the microbiome by aiding in nutrient absorption and promoting digestive efficiency. Given the traits of Ruminococcus sp. AF17-6, its motility and Gram-positive characteristics may enhance its ability to colonize and thrive in specific environments, potentially influencing the microbial community structure and functioning in its ecological niche. Understanding the specific traits of Ruminococcus sp. AF17-6 can contribute to broader insights into its role in digestion and nutrient cycling in various ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF17-6
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF17-6
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF17-6 AF17-6.Scaf55, whole genome shotgun

Gene Summary

Adenine Count

811804 bp

Thymine Count

817387 bp

Guanine Count

608742 bp

Cytosine Count

607969 bp

Genome Length

2846232 bp

Protein-coding Genes

2536 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
imidazole glycerol phosphate synthase subunit hishDWW94_02745Not AvailableNegative610119 - 61073322854.7
imidazoleglycerol-phosphate dehydratase hisbDWW94_02750Not AvailableNegative610734 - 61131220926.9
histidinol dehydrogenaseDWW94_02755Not AvailableNegative611331 - 61262046804.8
atp phosphoribosyltransferaseDWW94_02760Not AvailableNegative612650 - 61328523460.9
atp phosphoribosyltransferase regulatory subunitDWW94_02765Not AvailableNegative613305 - 61450444395.2
polc-type dna polymerase iiiDWW94_02770Not AvailableNegative614768 - 619246167853.0
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseDWW94_02775Not AvailableNegative619262 - 62031437270.8
peptidaseDWW94_02780Not AvailableNegative620329 - 62136937643.3
1-deoxy-d-xylulose-5-phosphate reductoisomeraseDWW94_02785Not AvailableNegative621737 - 62288241405.5
phosphatidate cytidylyltransferaseDWW94_02790Not AvailableNegative623007 - 62383730356.4

Displaying genes 591 – 600 of 2619 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.