Ruminococcus sp. AF17-6

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF17-6 is a Gram-positive bacterium characterized by its cocci shape. This organism possesses flagella, which suggests potential motility, enabling it to navigate its environment effectively. Ruminococcus sp. AF17-6 has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various ecological niches. The accession number for Ruminococcus sp. AF17-6 is QTWW00000000.1, which serves as a reference for its genomic data. This genomic information could provide insights into the metabolic pathways and ecological roles of the organism within its habitat. Ruminococcus species are often associated with the gastrointestinal tracts of various animals, where they play a vital role in the fermentation of complex carbohydrates. Their presence contributes to the overall health of the microbiome by aiding in nutrient absorption and promoting digestive efficiency. Given the traits of Ruminococcus sp. AF17-6, its motility and Gram-positive characteristics may enhance its ability to colonize and thrive in specific environments, potentially influencing the microbial community structure and functioning in its ecological niche. Understanding the specific traits of Ruminococcus sp. AF17-6 can contribute to broader insights into its role in digestion and nutrient cycling in various ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF17-6
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF17-6
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF17-6 AF17-6.Scaf55, whole genome shotgun

Gene Summary

Adenine Count

811804 bp

Thymine Count

817387 bp

Guanine Count

608742 bp

Cytosine Count

607969 bp

Genome Length

2846232 bp

Protein-coding Genes

2536 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-2 protease family proteinDWW94_08360Not AvailablePositive1836517 - 183718225043.4
hypothetical proteinDWW94_08365Not AvailablePositive1837209 - 183839345099.5
smc-scp complex subunit scpbDWW94_08370Not AvailablePositive1838414 - 183897720193.9
hypothetical proteinDWW94_08375Not AvailablePositive1838997 - 184000138149.5
sporulation protein ytfjDWW94_08380Not AvailablePositive1840022 - 184041713740.5
d-alanyl-d-alanine carboxypeptidaseDWW94_08385Not AvailablePositive1840520 - 184162640488.6
rrna pseudouridine synthaseDWW94_08390Not AvailablePositive1841664 - 184239527621.1
carboxyl transferaseDWW94_08395Not AvailablePositive1842629 - 184401147681.2
biotin/lipoyl-binding proteinDWW94_08400Not AvailablePositive1844050 - 184441211687.1
oxaloacetate decarboxylase subunit alphaDWW94_08405Not AvailablePositive1844450 - 184584752274.1

Displaying genes 1651 – 1660 of 2619 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.