Ruminococcus sp. AF17-6

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF17-6 is a Gram-positive bacterium characterized by its cocci shape. This organism possesses flagella, which suggests potential motility, enabling it to navigate its environment effectively. Ruminococcus sp. AF17-6 has a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability and efficiency in various ecological niches. The accession number for Ruminococcus sp. AF17-6 is QTWW00000000.1, which serves as a reference for its genomic data. This genomic information could provide insights into the metabolic pathways and ecological roles of the organism within its habitat. Ruminococcus species are often associated with the gastrointestinal tracts of various animals, where they play a vital role in the fermentation of complex carbohydrates. Their presence contributes to the overall health of the microbiome by aiding in nutrient absorption and promoting digestive efficiency. Given the traits of Ruminococcus sp. AF17-6, its motility and Gram-positive characteristics may enhance its ability to colonize and thrive in specific environments, potentially influencing the microbial community structure and functioning in its ecological niche. Understanding the specific traits of Ruminococcus sp. AF17-6 can contribute to broader insights into its role in digestion and nutrient cycling in various ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF17-6
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF17-6
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF17-6 AF17-6.Scaf55, whole genome shotgun

Gene Summary

Adenine Count

811804 bp

Thymine Count

817387 bp

Guanine Count

608742 bp

Cytosine Count

607969 bp

Genome Length

2846232 bp

Protein-coding Genes

2536 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sodium pump decarboxylase subunit gammaDWW94_08260Not AvailablePositive1818188 - 181864015615.3
sodium ion-translocating decarboxylase subunit betaDWW94_08265Not AvailablePositive1818672 - 181989543037.2
5'-deoxynucleotidaseDWW94_08270Not AvailablePositive1819965 - 182054922130.4
ribulose-phosphate 3-epimeraseDWW94_08275Not AvailablePositive1820636 - 182128923803.8
hypothetical proteinDWW94_08280Not AvailableNegative1821272 - 182181720876.4
abc transporter atp-binding proteinDWW94_08285Not AvailableNegative1821887 - 182383072990.5
adenosylmethionine decarboxylaseDWW94_08290Not AvailablePositive1824051 - 182486331133.0
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeDWW94_08295Not AvailablePositive1824880 - 182633152808.8
polyamine aminopropyltransferaseDWW94_08300Not AvailablePositive1826348 - 182719932950.3
agmatinaseDWW94_08305Not AvailablePositive1827211 - 182805931670.5

Displaying genes 1631 – 1640 of 2619 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.