Ruminococcus sp. AF25-17

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF25-17 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism has a single replicon, which contributes to its genetic organization and replication process. The strain is cataloged under the accession number QTWG00000000.1. The presence of flagella indicates that Ruminococcus sp. AF25-17 has the potential for motility, which may play a role in its ecological interactions within its environment. Being a member of the Ruminococcus genus, this bacterium is likely involved in the fermentation of complex carbohydrates, particularly in anaerobic environments such as the gastrointestinal tracts of ruminants or in other decomposing organic matter. Understanding the traits of Ruminococcus sp. AF25-17 contributes to our knowledge of microbial diversity and function, especially in relation to its ecological niche. The specific adaptations, such as its Gram-positive nature and motility, suggest a potential role in microbial communities where competition for resources and movement towards substrates are critical for survival and ecological balance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF25-17
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF25-17
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF25-17 AF25-17.Scaf147, whole genome shotgun

Gene Summary

Adenine Count

976929 bp

Thymine Count

976779 bp

Guanine Count

671177 bp

Cytosine Count

671437 bp

Genome Length

3296322 bp

Protein-coding Genes

2772 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glyoxalaseDWY40_05020Not AvailablePositive1064194 - 106455614186.2
pyridoxal 5'-phosphate synthase glutaminase subunit pdxtDWY40_05025Not AvailableNegative1064695 - 106527321289.7
plp-dependent aminotransferase family proteinDWY40_05035Not AvailablePositive1066237 - 106769155954.4
yhge/pip domain-containing proteinDWY40_05050Not AvailableNegative1069521 - 107170777915.2
yhge/pip domain-containing proteinDWY40_05055Not AvailableNegative1071709 - 107424992319.7
tetr/acrr family transcriptional regulatorDWY40_05060Not AvailablePositive1074644 - 107524022899.4
sodium-dependent transporterDWY40_05065Not AvailablePositive1075244 - 107661449923.8
nitrogen fixation protein nifhDWY40_05070Not AvailablePositive1076968 - 107773527981.5
nitrogenase molybdenum-iron proteinDWY40_05080Not AvailablePositive1079144 - 108024740711.5
hypc/hybg/hupf family hydrogenase formation chaperoneDWY40_05090Not AvailablePositive1082687 - 10828967349.67

Displaying genes 921 – 930 of 2826 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.