Ruminococcus sp. AF25-17

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF25-17 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism has a single replicon, which contributes to its genetic organization and replication process. The strain is cataloged under the accession number QTWG00000000.1. The presence of flagella indicates that Ruminococcus sp. AF25-17 has the potential for motility, which may play a role in its ecological interactions within its environment. Being a member of the Ruminococcus genus, this bacterium is likely involved in the fermentation of complex carbohydrates, particularly in anaerobic environments such as the gastrointestinal tracts of ruminants or in other decomposing organic matter. Understanding the traits of Ruminococcus sp. AF25-17 contributes to our knowledge of microbial diversity and function, especially in relation to its ecological niche. The specific adaptations, such as its Gram-positive nature and motility, suggest a potential role in microbial communities where competition for resources and movement towards substrates are critical for survival and ecological balance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF25-17
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF25-17
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF25-17 AF25-17.Scaf147, whole genome shotgun

Gene Summary

Adenine Count

976929 bp

Thymine Count

976779 bp

Guanine Count

671177 bp

Cytosine Count

671437 bp

Genome Length

3296322 bp

Protein-coding Genes

2772 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
plp-dependent aminotransferase family proteinDWY40_01865Not AvailableNegative368368 - 36977153405.4
glutamine--trna ligase/yqey domain fusion proteinDWY40_01870Not AvailableNegative369855 - 37152564705.9
nudix hydrolaseDWY40_01875Not AvailableNegative371815 - 37250726012.5
hypothetical proteinDWY40_01880Not AvailableNegative372532 - 37288814062.4
Trna-thrNot AvailableNot AvailablePositive373113 - 373184Not Available
d-tyrosyl-trna(tyr) deacylaseDWY40_01890Not AvailableNegative373244 - 37369016431.8
cpbp family intramembrane metalloproteaseDWY40_01895Not AvailableNegative373695 - 37409614924.0
hypothetical proteinDWY40_01900Not AvailableNegative374111 - 37453615717.0
sigma-70 family rna polymerase sigma factorDWY40_01905Not AvailableNegative374550 - 37516123301.0
23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmbDWY40_01910Not AvailableNegative375207 - 37597127591.3

Displaying genes 351 – 360 of 2826 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.