Ruminococcus sp. AF25-17

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF25-17 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism has a single replicon, which contributes to its genetic organization and replication process. The strain is cataloged under the accession number QTWG00000000.1. The presence of flagella indicates that Ruminococcus sp. AF25-17 has the potential for motility, which may play a role in its ecological interactions within its environment. Being a member of the Ruminococcus genus, this bacterium is likely involved in the fermentation of complex carbohydrates, particularly in anaerobic environments such as the gastrointestinal tracts of ruminants or in other decomposing organic matter. Understanding the traits of Ruminococcus sp. AF25-17 contributes to our knowledge of microbial diversity and function, especially in relation to its ecological niche. The specific adaptations, such as its Gram-positive nature and motility, suggest a potential role in microbial communities where competition for resources and movement towards substrates are critical for survival and ecological balance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF25-17
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF25-17
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF25-17 AF25-17.Scaf147, whole genome shotgun

Gene Summary

Adenine Count

976929 bp

Thymine Count

976779 bp

Guanine Count

671177 bp

Cytosine Count

671437 bp

Genome Length

3296322 bp

Protein-coding Genes

2772 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xre family transcriptional regulatorDWY40_13195Not AvailablePositive2785110 - 278546913780.3
atp-binding proteinDWY40_13200Not AvailableNegative2785701 - 278601511493.0
lactoylglutathione lyaseDWY40_13210Not AvailableNegative2787407 - 278777514318.9
aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzymeDWY40_13215Not AvailablePositive2788088 - 278937447266.9
had family phosphataseDWY40_13220Not AvailablePositive2789649 - 279033826359.1
aspartate--ammonia ligaseDWY40_13225Not AvailableNegative2790437 - 279144738340.2
tmem198/tm7sf3 family proteinDWY40_13230Not AvailablePositive2791641 - 279268738186.1
4fe-4s dicluster domain-containing proteinDWY40_13235Not AvailableNegative2792757 - 279325117366.3
selenium-dependent xanthine dehydrogenaseDWY40_13240Not AvailableNegative2793254 - 279583693150.1
trpr yerc/yecdDWY40_13250Not AvailablePositive2797545 - 279785912006.2

Displaying genes 2371 – 2380 of 2826 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.