Ruminococcus sp. AF25-17

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF25-17 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism has a single replicon, which contributes to its genetic organization and replication process. The strain is cataloged under the accession number QTWG00000000.1. The presence of flagella indicates that Ruminococcus sp. AF25-17 has the potential for motility, which may play a role in its ecological interactions within its environment. Being a member of the Ruminococcus genus, this bacterium is likely involved in the fermentation of complex carbohydrates, particularly in anaerobic environments such as the gastrointestinal tracts of ruminants or in other decomposing organic matter. Understanding the traits of Ruminococcus sp. AF25-17 contributes to our knowledge of microbial diversity and function, especially in relation to its ecological niche. The specific adaptations, such as its Gram-positive nature and motility, suggest a potential role in microbial communities where competition for resources and movement towards substrates are critical for survival and ecological balance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF25-17
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF25-17
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF25-17 AF25-17.Scaf147, whole genome shotgun

Gene Summary

Adenine Count

976929 bp

Thymine Count

976779 bp

Guanine Count

671177 bp

Cytosine Count

671437 bp

Genome Length

3296322 bp

Protein-coding Genes

2772 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yebc/pmpr family dna-binding transcriptional regulatorDWY40_07935Not AvailableNegative1707977 - 170870826914.3
type ii toxin-antitoxin system pemk/mazf family toxinDWY40_07940Not AvailableNegative1708848 - 170919213021.1
alanine racemaseDWY40_07945Not AvailableNegative1709343 - 171050943770.9
nad(p)h-hydrate dehydrataseDWY40_07950Not AvailableNegative1710513 - 171203054338.0
redox-sensing transcriptional repressor rexDWY40_07955Not AvailableNegative1712149 - 171278423697.6
abc transporter atp-binding proteinDWY40_07960Not AvailablePositive1712950 - 171489073481.4
2-isopropylmalate synthaseDWY40_07965Not AvailableNegative1714994 - 171698275260.2
d-alanyl-d-alanine carboxypeptidaseDWY40_07970Not AvailableNegative1717081 - 171843951378.6
smc-scp complex subunit scpbDWY40_07975Not AvailableNegative1718520 - 171909221815.5
segregation/condensation protein aDWY40_07980Not AvailableNegative1719093 - 171984529726.6

Displaying genes 1441 – 1450 of 2826 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.