Ruminococcus sp. AF25-17

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF25-17 is a Gram-positive bacterium characterized by its cocci shape and the presence of flagella. This organism has a single replicon, which contributes to its genetic organization and replication process. The strain is cataloged under the accession number QTWG00000000.1. The presence of flagella indicates that Ruminococcus sp. AF25-17 has the potential for motility, which may play a role in its ecological interactions within its environment. Being a member of the Ruminococcus genus, this bacterium is likely involved in the fermentation of complex carbohydrates, particularly in anaerobic environments such as the gastrointestinal tracts of ruminants or in other decomposing organic matter. Understanding the traits of Ruminococcus sp. AF25-17 contributes to our knowledge of microbial diversity and function, especially in relation to its ecological niche. The specific adaptations, such as its Gram-positive nature and motility, suggest a potential role in microbial communities where competition for resources and movement towards substrates are critical for survival and ecological balance.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF25-17
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF25-17
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF25-17 AF25-17.Scaf147, whole genome shotgun

Gene Summary

Adenine Count

976929 bp

Thymine Count

976779 bp

Guanine Count

671177 bp

Cytosine Count

671437 bp

Genome Length

3296322 bp

Protein-coding Genes

2772 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtp-sensing pleiotropic transcriptional regulator codyDWY40_06815Not AvailableNegative1464977 - 146575628583.5
type i dna topoisomeraseDWY40_06820Not AvailableNegative1465918 - 146799378114.6
atp-binding proteinDWY40_06830Not AvailableNegative1469118 - 147068658027.6
rna polymerase sporulation sigma factor sigkDWY40_06835Not AvailablePositive1470929 - 147154623867.7
u32 family peptidaseDWY40_06840Not AvailableNegative1471563 - 147280747490.1
o-methyltransferaseDWY40_06845Not AvailableNegative1472804 - 147345724653.9
transcriptional repressorDWY40_06855Not AvailableNegative1475147 - 147560817836.6
duf1292 domain-containing proteinDWY40_06860Not AvailableNegative1475728 - 14759889767.23
holliday junction resolvase ruvxDWY40_06865Not AvailableNegative1476000 - 147643716709.4
ireb family regulatory phosphoproteinDWY40_06870Not AvailableNegative1476445 - 14767089933.83

Displaying genes 1241 – 1250 of 2826 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.