Ruminococcus sp. AF25-19

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AF25-19 is a Gram-positive bacterium characterized by its cocci shape. This organism possesses flagella, which may contribute to its motility in various environments. Ruminococcus sp. AF25-19 is noted for having a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The accession number for Ruminococcus sp. AF25-19 is QTWF00000000.1, which provides a unique identifier for this strain in genomic databases. This identification allows for the tracking of research and findings related to this specific microorganism. Ecologically, Ruminococcus species are typically associated with the digestive systems of herbivores, where they play a crucial role in the fermentation of complex carbohydrates. The presence of flagella suggests that Ruminococcus sp. AF25-19 may have enhanced mobility, potentially aiding in its ability to colonize specific niches within the gut environment. This motility could be significant for competing with other microbial species and efficiently accessing substrates for fermentation. In summary, Ruminococcus sp. AF25-19 is a motile, Gram-positive cocci with a single replicon, and its ecological role likely involves contributing to the fermentation processes in the digestive systems of herbivores, highlighting its importance in microbial communities and nutrient cycling within those ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AF25-19
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AF25-19
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AF25-19 AF25-19.Scaf74, whole genome shotgun

Gene Summary

Adenine Count

877632 bp

Thymine Count

854704 bp

Guanine Count

665332 bp

Cytosine Count

621648 bp

Genome Length

3020487 bp

Protein-coding Genes

2645 genes

Non-Coding Genes

103 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hd domain-containing proteinDWY44_11055Not AvailablePositive2389544 - 23897658383.95
crispr-associated helicase cas3'DWY44_11060Not AvailablePositive2390040 - 239225083989.2
type i-c crispr-associated protein cas5DWY44_11065Not AvailablePositive2392559 - 239327827701.3
type i-c crispr-associated protein cas8c/csd1DWY44_11070Not AvailablePositive2393272 - 239506567524.5
type i-c crispr-associated protein cas7/csd2DWY44_11075Not AvailablePositive2395083 - 239594932321.6
crispr-associated protein cas4DWY44_11080Not AvailablePositive2395949 - 239662926127.0
type i-c crispr-associated endonuclease cas1DWY44_11085Not AvailablePositive2396622 - 239764438791.9
crispr-associated endonuclease cas2DWY44_11090Not AvailablePositive2397656 - 239794611320.5
polysaccharide deacetylaseDWY44_11095Not AvailablePositive2398650 - 239948931099.8
hypothetical proteinDWY44_11100Not AvailablePositive2399649 - 240132259542.9

Displaying genes 2181 – 2190 of 2748 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.