Ruminococcus sp. AM22-14LB

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM22-14LB is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which suggests it has the ability to move in its environment. Genomic analysis indicates that Ruminococcus sp. AM22-14LB has a single replicon, suggesting a streamlined genetic structure that may facilitate efficient replication and adaptation. The strain has been assigned the accession number QTUP00000000.1, which provides a reference for its genomic sequence in databases. This information is crucial for researchers studying the genetics and functional capabilities of this bacterium. From a biological and ecological perspective, the presence of Ruminococcus species in various environments, particularly in the gastrointestinal tracts of herbivores, indicates their potential role in the digestion of complex carbohydrates. This is significant for the degradation of plant materials, contributing to nutrient cycling and energy flow in ecosystems. Understanding the traits of Ruminococcus sp. AM22-14LB can enhance our knowledge of microbial diversity and its implications for digestion and fermentation processes in various ecological contexts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM22-14LB
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM22-14LB
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM22-14LB AM22-14LB.Scaf50, whole genome shotgun

Gene Summary

Adenine Count

972046 bp

Thymine Count

933410 bp

Guanine Count

670854 bp

Cytosine Count

621459 bp

Genome Length

3197829 bp

Protein-coding Genes

2829 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tigr04086 family membrane proteinDW256_09640Not AvailablePositive2076663 - 207704313524.2
six-cysteine peptide sciffDW256_09645Not AvailablePositive2077141 - 20772844993.95
thioether cross-link-forming sciff peptide maturaseDW256_09650Not AvailablePositive2077510 - 207891053508.4
protein translocase subunit secdDW256_09655Not AvailablePositive2078947 - 208135586622.2
single-stranded-dna-specific exonuclease recjDW256_09660Not AvailablePositive2081498 - 208322264784.8
bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolaseDW256_09665Not AvailablePositive2083359 - 208566287697.4
mbl fold metallo-hydrolaseDW256_09670Not AvailablePositive2085676 - 208629623013.5
coproporphyrinogen dehydrogenase hemzDW256_09675Not AvailablePositive2086293 - 208772053944.0
hypothetical proteinDW256_09680Not AvailablePositive2088325 - 208887921403.5
acyltransferaseDW256_09685Not AvailablePositive2088898 - 208994140788.7

Displaying genes 1861 – 1870 of 2888 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.