Ruminococcus sp. AM22-14LB

Gram-positiveCocci

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Ruminococcus

Description

Ruminococcus sp. AM22-14LB is a Gram-positive bacterium characterized by its cocci shape. This species possesses flagella, which suggests it has the ability to move in its environment. Genomic analysis indicates that Ruminococcus sp. AM22-14LB has a single replicon, suggesting a streamlined genetic structure that may facilitate efficient replication and adaptation. The strain has been assigned the accession number QTUP00000000.1, which provides a reference for its genomic sequence in databases. This information is crucial for researchers studying the genetics and functional capabilities of this bacterium. From a biological and ecological perspective, the presence of Ruminococcus species in various environments, particularly in the gastrointestinal tracts of herbivores, indicates their potential role in the digestion of complex carbohydrates. This is significant for the degradation of plant materials, contributing to nutrient cycling and energy flow in ecosystems. Understanding the traits of Ruminococcus sp. AM22-14LB can enhance our knowledge of microbial diversity and its implications for digestion and fermentation processes in various ecological contexts.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyOscillospiraceae
GenusRuminococcus
SpeciesRuminococcus sp. AM22-14LB
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeCocci
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Ruminococcus sp. AM22-14LB
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcus sp. AM22-14LB AM22-14LB.Scaf50, whole genome shotgun

Gene Summary

Adenine Count

972046 bp

Thymine Count

933410 bp

Guanine Count

670854 bp

Cytosine Count

621459 bp

Genome Length

3197829 bp

Protein-coding Genes

2829 genes

Non-Coding Genes

59 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rrf2 family transcriptional regulatorDW256_07740Not AvailableNegative1668997 - 166943416353.7
nad-dependent protein deacetylase, sir2 familyDW256_07745Not AvailablePositive1669589 - 167045833974.6
nad-dependent protein deacetylase, sir2 familyDW256_07750Not AvailablePositive1670458 - 167130632294.1
nad-dependent protein deacetylaseDW256_07755Not AvailablePositive1671346 - 167233237647.8
arac family transcriptional regulatorDW256_07760Not AvailableNegative1672433 - 167286116666.4
helix-turn-helix domain-containing proteinDW256_07765Not AvailablePositive1672964 - 167362324994.6
dna-binding response regulatorDW256_07770Not AvailablePositive1673838 - 167456927766.5
hypothetical proteinDW256_07775Not AvailablePositive1674743 - 16749377195.54
quinolinate synthase nadaDW256_07785Not AvailablePositive1677073 - 167797833976.2
l-aspartate oxidaseDW256_07790Not AvailablePositive1678067 - 167931446335.8

Displaying genes 1491 – 1500 of 2888 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.