Burkholderia ubonensis strain Bp8958

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia ubonensis strain Bp8958 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. This trait may influence its adaptability and potential applications in various biotechnological contexts. The strain is cataloged under the accession number QTOC00000000.1, which serves as a reference point for researchers seeking to access its genomic information. The streamlined replicon structure of Burkholderia ubonensis strain Bp8958 may play a role in its metabolic capabilities and environmental interactions. As a member of the Burkholderia genus, it is likely adapted to diverse environments, exhibiting traits that could enhance its survival and proliferation in various ecological niches. The single replicon may also facilitate the study of gene functions and interactions within this strain, providing insights into its potential uses in bioremediation or agricultural biotechnology. Overall, the genetic characteristics of Burkholderia ubonensis strain Bp8958 underscore its relevance in microbiological research. The presence of a single replicon suggests a level of genetic simplicity that may be advantageous for specific applications, while the strain’s classification within the Burkholderia genus indicates its potential ecological significance and versatility in various environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia ubonensis
Strainstrain Bp8958

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia ubonensis strain Bp8958 Bp8958_93, whole genome

Gene Summary

Adenine Count

1283982 bp

Thymine Count

1287654 bp

Guanine Count

2603520 bp

Cytosine Count

2595526 bp

Genome Length

7770682 bp

Protein-coding Genes

6716 genes

Non-Coding Genes

184 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysm peptidoglycan-binding domain-containing proteinDF011_06750Not AvailablePositive1457015 - 145790530336.1
rna polymerase sigma factor rposDF011_06755Not AvailablePositive1457917 - 145900541082.2
3'-5' exonucleaseDF011_06760Not AvailablePositive1459006 - 145978229258.7
endonucleaseDF011_06765Not AvailableNegative1459792 - 146064630825.4
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdDF011_06770Not AvailablePositive1460759 - 146211449792.4
bax inhibitor (bi)-1/ycca family proteinDF011_06775Not AvailableNegative1462181 - 146287925057.3
nucleoside-diphosphate kinaseDF011_06780Not AvailablePositive1463129 - 146355415348.5
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnDF011_06785Not AvailablePositive1463612 - 146475141335.2
helix-turn-helix domain-containing proteinDF011_06790Not AvailablePositive1464919 - 146595634408.7
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthaseDF011_06795Not AvailablePositive1466069 - 146737346470.8

Displaying genes 1441 – 1450 of 6900 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.