Bacteroides sp. AM41-16

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AM41-16 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility and ecological adaptability. This species contains a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and cellular function. The accession number for Bacteroides sp. AM41-16 is QTNE00000000.1, which serves as a reference for further genetic and taxonomic studies. Bacteroides species are widely recognized for their role in the human gut microbiome, where they are involved in the digestion of complex carbohydrates and contribute to the overall metabolic processes of the host. The presence of flagella in Bacteroides sp. AM41-16 suggests potential advantages in its habitat, allowing for movement towards nutrient sources or away from unfavorable conditions. This motility may enhance its ability to colonize environments within the gut, where competition for resources among microbial species is fierce. In summary, the distinct morphology and genetic characteristics of Bacteroides sp. AM41-16 underscore its potential role in microbial ecology, particularly within the gut microbiome. Its motility may provide competitive advantages that contribute to its survival and functionality in complex microbial communities. Understanding such traits can offer insights into the dynamics of microbial populations and their interactions within host environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AM41-16
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AM41-16 AM41-16.Scaf57, whole genome shotgun

Gene Summary

Adenine Count

1292730 bp

Thymine Count

1324792 bp

Guanine Count

1153764 bp

Cytosine Count

1134181 bp

Genome Length

4905507 bp

Protein-coding Genes

4090 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nucleoside triphosphate pyrophosphohydrolaseDW896_03195Not AvailableNegative716811 - 71763531865.6
duf3810 domain-containing proteinDW896_03200Not AvailableNegative717644 - 71869040477.0
valine--trna ligaseDW896_03205Not AvailablePositive718877 - 72151099784.0
glycoside hydrolase, family 9 proteinDW896_03210Not AvailableNegative721588 - 72400291375.4
thua domain-containing proteinDW896_03215Not AvailableNegative724008 - 72493735188.1
hypothetical proteinDW896_03220Not AvailableNegative724934 - 72542819053.4
rna polymerase sigma-70 factorDW896_03225Not AvailableNegative725653 - 72623123127.2
duf4974 domain-containing proteinDW896_03230Not AvailablePositive726369 - 72738239018.0
susc/raga family tonb-linked outer membrane proteinDW896_03235Not AvailablePositive727618 - 731019126302.0
ragb/susd family nutrient uptake outer membrane proteinDW896_03240Not AvailablePositive731032 - 73302373383.1

Displaying genes 631 – 640 of 4167 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.