Bacteroides sp. AM41-16

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AM41-16 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility and ecological adaptability. This species contains a single replicon, indicating a streamlined genomic structure that can facilitate efficient replication and cellular function. The accession number for Bacteroides sp. AM41-16 is QTNE00000000.1, which serves as a reference for further genetic and taxonomic studies. Bacteroides species are widely recognized for their role in the human gut microbiome, where they are involved in the digestion of complex carbohydrates and contribute to the overall metabolic processes of the host. The presence of flagella in Bacteroides sp. AM41-16 suggests potential advantages in its habitat, allowing for movement towards nutrient sources or away from unfavorable conditions. This motility may enhance its ability to colonize environments within the gut, where competition for resources among microbial species is fierce. In summary, the distinct morphology and genetic characteristics of Bacteroides sp. AM41-16 underscore its potential role in microbial ecology, particularly within the gut microbiome. Its motility may provide competitive advantages that contribute to its survival and functionality in complex microbial communities. Understanding such traits can offer insights into the dynamics of microbial populations and their interactions within host environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AM41-16
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AM41-16 AM41-16.Scaf57, whole genome shotgun

Gene Summary

Adenine Count

1292730 bp

Thymine Count

1324792 bp

Guanine Count

1153764 bp

Cytosine Count

1134181 bp

Genome Length

4905507 bp

Protein-coding Genes

4090 genes

Non-Coding Genes

77 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4286 family proteinDW896_05705Not AvailableNegative1272949 - 127325411936.3
Trna-alaNot AvailableNot AvailablePositive1273358 - 1273434Not Available
mfs transporterDW896_05720Not AvailableNegative1274376 - 127557243379.0
ragb/susd family nutrient uptake outer membrane proteinDW896_05725Not AvailableNegative1275687 - 127702450759.2
susc/raga family tonb-linked outer membrane proteinDW896_05730Not AvailableNegative1277044 - 1280337123083.0
duf5117 domain-containing proteinDW896_05735Not AvailableNegative1280381 - 128302399445.8
phenylalanine--trna ligase subunit alphaDW896_05740Not AvailablePositive1283380 - 128441439154.7
mfs transporterDW896_05745Not AvailablePositive1284521 - 128571743482.6
endonuclease iiiDW896_05750Not AvailablePositive1285714 - 128638825616.1
phosphoglycerate kinaseDW896_05755Not AvailablePositive1286477 - 128773645083.1

Displaying genes 1121 – 1130 of 4167 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.