Clostridium sp. AF15-41

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF15-41 is characterized by having a single replicon, which indicates a streamlined genomic structure typical of certain bacterial species. Its genetic material is cataloged under the accession number QTMQ00000000.1, which supports its identification and provides a reference for genomic studies. The single replicon trait suggests that Clostridium sp. AF15-41 may possess an efficient replication mechanism, allowing for effective growth and division in suitable environments. This could imply a potential adaptability to various ecological niches, particularly in anaerobic conditions where many Clostridium species thrive. In ecological terms, the presence of Clostridium sp. AF15-41 within a given environment may play a role in the decomposition of organic material, contributing to nutrient cycling. Clostridia are commonly found in soil and the gastrointestinal tracts of animals, where they participate in the breakdown of complex carbohydrates and proteins. Therefore, understanding the specific traits of Clostridium sp. AF15-41 can provide insights into its ecological functions and potential applications in biotechnology, such as in bioremediation or fermentation processes. In summary, Clostridium sp. AF15-41, with its single replicon structure and corresponding genomic accession, presents a noteworthy case for studying microbial adaptability and ecological contributions in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF15-41
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF15-41 AF15-41.Scaf30, whole genome shotgun

Gene Summary

Adenine Count

798090 bp

Thymine Count

823651 bp

Guanine Count

543349 bp

Cytosine Count

582556 bp

Genome Length

2747936 bp

Protein-coding Genes

2297 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iv pilus assembly protein pilmDWW43_03260Not AvailableNegative738208 - 73982758774.9
prepilin-type n-terminal cleavage/methylation domain-containing proteinDWW43_03265Not AvailableNegative740276 - 74068614411.3
type ii secretion system f family proteinDWW43_03270Not AvailableNegative740828 - 74203643859.7
type iv pilus twitching motility protein piltDWW43_03275Not AvailableNegative742220 - 74328138954.0
type ii secretion system protein gspeDWW43_03280Not AvailableNegative743468 - 74518662335.5
sigma-70 family rna polymerase sigma factorDWW43_03285Not AvailablePositive745334 - 74601425757.5
u32 family peptidaseDWW43_03290Not AvailableNegative746020 - 74724946788.6
o-methyltransferaseDWW43_03295Not AvailableNegative747332 - 74798824892.1
hypothetical proteinDWW43_03300Not AvailableNegative747985 - 74847317721.2
ylbf family regulatorDWW43_03305Not AvailableNegative748532 - 74886713202.6

Displaying genes 661 – 670 of 2357 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.