Clostridium sp. AF15-41

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF15-41 is characterized by having a single replicon, which indicates a streamlined genomic structure typical of certain bacterial species. Its genetic material is cataloged under the accession number QTMQ00000000.1, which supports its identification and provides a reference for genomic studies. The single replicon trait suggests that Clostridium sp. AF15-41 may possess an efficient replication mechanism, allowing for effective growth and division in suitable environments. This could imply a potential adaptability to various ecological niches, particularly in anaerobic conditions where many Clostridium species thrive. In ecological terms, the presence of Clostridium sp. AF15-41 within a given environment may play a role in the decomposition of organic material, contributing to nutrient cycling. Clostridia are commonly found in soil and the gastrointestinal tracts of animals, where they participate in the breakdown of complex carbohydrates and proteins. Therefore, understanding the specific traits of Clostridium sp. AF15-41 can provide insights into its ecological functions and potential applications in biotechnology, such as in bioremediation or fermentation processes. In summary, Clostridium sp. AF15-41, with its single replicon structure and corresponding genomic accession, presents a noteworthy case for studying microbial adaptability and ecological contributions in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF15-41
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF15-41 AF15-41.Scaf30, whole genome shotgun

Gene Summary

Adenine Count

798090 bp

Thymine Count

823651 bp

Guanine Count

543349 bp

Cytosine Count

582556 bp

Genome Length

2747936 bp

Protein-coding Genes

2297 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
conjugal transfer protein traxDWW43_11825Not AvailableNegative2713503 - 271420427065.3
23s rrna (uracil(1939)-c(5))-methyltransferase rlmdDWW43_11830Not AvailableNegative2714224 - 271543245676.2
prolyl-trna synthetase associated domain-containing proteinDWW43_11835Not AvailableNegative2715540 - 271608520612.9
ggdef domain-containing proteinDWW43_11840Not AvailableNegative2716114 - 271785067569.7
low molecular weight phosphotyrosine protein phosphataseDWW43_11845Not AvailableNegative2717948 - 271843018236.8
site-specific integraseDWW43_11850Not AvailableNegative2718610 - 271980946593.3
transposaseDWW43_11855Not AvailableNegative2719944 - 27201537965.41
aaa family atpaseDWW43_11860Not AvailableNegative2720150 - 272096531248.6
hypothetical proteinDWW43_11865Not AvailableNegative2720965 - 272149220155.3
hypothetical proteinDWW43_11875Not AvailablePositive2722226 - 27224297375.94

Displaying genes 2321 – 2330 of 2357 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.