Clostridium sp. AF15-41

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium sp. AF15-41 is characterized by having a single replicon, which indicates a streamlined genomic structure typical of certain bacterial species. Its genetic material is cataloged under the accession number QTMQ00000000.1, which supports its identification and provides a reference for genomic studies. The single replicon trait suggests that Clostridium sp. AF15-41 may possess an efficient replication mechanism, allowing for effective growth and division in suitable environments. This could imply a potential adaptability to various ecological niches, particularly in anaerobic conditions where many Clostridium species thrive. In ecological terms, the presence of Clostridium sp. AF15-41 within a given environment may play a role in the decomposition of organic material, contributing to nutrient cycling. Clostridia are commonly found in soil and the gastrointestinal tracts of animals, where they participate in the breakdown of complex carbohydrates and proteins. Therefore, understanding the specific traits of Clostridium sp. AF15-41 can provide insights into its ecological functions and potential applications in biotechnology, such as in bioremediation or fermentation processes. In summary, Clostridium sp. AF15-41, with its single replicon structure and corresponding genomic accession, presents a noteworthy case for studying microbial adaptability and ecological contributions in anaerobic environments.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium sp. AF15-41
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium sp. AF15-41 AF15-41.Scaf30, whole genome shotgun

Gene Summary

Adenine Count

798090 bp

Thymine Count

823651 bp

Guanine Count

543349 bp

Cytosine Count

582556 bp

Genome Length

2747936 bp

Protein-coding Genes

2297 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioether cross-link-forming sciff peptide maturaseDWW43_06520Not AvailablePositive1459875 - 146123951586.4
protein translocase subunit secdDWW43_06525Not AvailablePositive1461260 - 146350379692.4
phosphataseDWW43_06530Not AvailablePositive1463680 - 146400011882.2
type ii toxin-antitoxin system rele/pare family toxinDWW43_06535Not AvailablePositive1463997 - 146434413626.3
had family phosphataseDWW43_06540Not AvailablePositive1464371 - 146502424291.5
sensor histidine kinaseDWW43_06550Not AvailableNegative1465731 - 146703549257.8
dna-binding response regulatorDWW43_06555Not AvailableNegative1467032 - 146778728953.9
carbohydrate abc transporter substrate-binding proteinDWW43_06560Not AvailablePositive1467840 - 147020088810.5
sugar abc transporter permeaseDWW43_06565Not AvailablePositive1470207 - 147115735931.9
carbohydrate abc transporter permeaseDWW43_06570Not AvailablePositive1471154 - 147201131547.5

Displaying genes 1281 – 1290 of 2357 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.