Bacteroides sp. AF20-13LB

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF20-13LB is characterized as a rod-shaped bacterium, which is typical for members of the Bacteroides genus. This organism possesses flagella, indicating that it has the capability for motility. The genetic makeup of Bacteroides sp. AF20-13LB is represented by a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and adaptation. The strain is cataloged under the accession number QTMH00000000.1, which provides a reference for researchers wishing to access its genomic information. The presence of flagella may enhance its ability to navigate its environment, which could be significant for its survival and function within various ecological niches, particularly in the human gut where Bacteroides species are commonly found. In terms of ecological insight, Bacteroides species, including AF20-13LB, play an essential role in the digestion of complex carbohydrates and contribute to the overall health of the gut microbiota. Their motility may allow them to effectively colonize and interact with other microbial communities, thereby influencing gut health and metabolism. Understanding the traits of Bacteroides sp. AF20-13LB may provide insights into its role within microbial ecosystems and its potential contributions to host health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF20-13LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF20-13LB AF20-13LB.Scaf45, whole genome shotgun

Gene Summary

Adenine Count

1362503 bp

Thymine Count

1316872 bp

Guanine Count

1128488 bp

Cytosine Count

1185463 bp

Genome Length

4993547 bp

Protein-coding Genes

4175 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sigma-54-dependent fis family transcriptional regulatorDWX62_20955Not AvailableNegative4806721 - 480804349691.2
hybrid sensor histidine kinase/response regulatorDWX62_20960Not AvailableNegative4808036 - 480978464948.1
tetracycline resistance ribosomal protection protein tet(q)DWX62_20970Not AvailableNegative4810353 - 481227872226.1
dna methylaseDWX62_20975Not AvailableNegative4812936 - 4818752219860.0
duf1896 domain-containing proteinDWX62_20980Not AvailableNegative4818742 - 481932922268.0
type ia dna topoisomeraseDWX62_20985Not AvailableNegative4819357 - 482144477608.9
duf4099 domain-containing proteinDWX62_20990Not AvailableNegative4821505 - 482307659804.1
dna-binding proteinDWX62_20995Not AvailableNegative4823097 - 482344713925.0
dna-binding proteinDWX62_21000Not AvailableNegative4823451 - 482381314059.1
hypothetical proteinDWX62_21005Not AvailablePositive4823812 - 48240097273.61

Displaying genes 4081 – 4090 of 4242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.