Bacteroides sp. AF20-13LB

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF20-13LB is characterized as a rod-shaped bacterium, which is typical for members of the Bacteroides genus. This organism possesses flagella, indicating that it has the capability for motility. The genetic makeup of Bacteroides sp. AF20-13LB is represented by a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and adaptation. The strain is cataloged under the accession number QTMH00000000.1, which provides a reference for researchers wishing to access its genomic information. The presence of flagella may enhance its ability to navigate its environment, which could be significant for its survival and function within various ecological niches, particularly in the human gut where Bacteroides species are commonly found. In terms of ecological insight, Bacteroides species, including AF20-13LB, play an essential role in the digestion of complex carbohydrates and contribute to the overall health of the gut microbiota. Their motility may allow them to effectively colonize and interact with other microbial communities, thereby influencing gut health and metabolism. Understanding the traits of Bacteroides sp. AF20-13LB may provide insights into its role within microbial ecosystems and its potential contributions to host health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF20-13LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF20-13LB AF20-13LB.Scaf45, whole genome shotgun

Gene Summary

Adenine Count

1362503 bp

Thymine Count

1316872 bp

Guanine Count

1128488 bp

Cytosine Count

1185463 bp

Genome Length

4993547 bp

Protein-coding Genes

4175 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
elongation factor tuDWX62_19060Not AvailableNegative4388899 - 439008343544.6
Trna-thrNot AvailableNot AvailablePositive4390134 - 4390205Not Available
Trna-tyrNot AvailableNot AvailablePositive4390220 - 4390305Not Available
Trna-thrNot AvailableNot AvailablePositive4390430 - 4390503Not Available
ribosome-associated translation inhibitor raiaDWX62_19080Not AvailableNegative4390597 - 439089611423.8
tyrosine recombinase xercDWX62_19085Not AvailableNegative4390915 - 439179933786.0
30s ribosomal protein s21DWX62_19090Not AvailableNegative4391873 - 43920647559.34
aminopeptidase p family proteinDWX62_19095Not AvailablePositive4392344 - 439413766385.2
gamma carbonic anhydrase family proteinDWX62_19100Not AvailablePositive4394142 - 439465418238.9
3-deoxy-d-manno-octulosonic acid transferaseDWX62_19105Not AvailableNegative4394747 - 439596747500.7

Displaying genes 3711 – 3720 of 4242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.