Bacteroides sp. AF20-13LB

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF20-13LB is characterized as a rod-shaped bacterium, which is typical for members of the Bacteroides genus. This organism possesses flagella, indicating that it has the capability for motility. The genetic makeup of Bacteroides sp. AF20-13LB is represented by a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and adaptation. The strain is cataloged under the accession number QTMH00000000.1, which provides a reference for researchers wishing to access its genomic information. The presence of flagella may enhance its ability to navigate its environment, which could be significant for its survival and function within various ecological niches, particularly in the human gut where Bacteroides species are commonly found. In terms of ecological insight, Bacteroides species, including AF20-13LB, play an essential role in the digestion of complex carbohydrates and contribute to the overall health of the gut microbiota. Their motility may allow them to effectively colonize and interact with other microbial communities, thereby influencing gut health and metabolism. Understanding the traits of Bacteroides sp. AF20-13LB may provide insights into its role within microbial ecosystems and its potential contributions to host health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF20-13LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF20-13LB AF20-13LB.Scaf45, whole genome shotgun

Gene Summary

Adenine Count

1362503 bp

Thymine Count

1316872 bp

Guanine Count

1128488 bp

Cytosine Count

1185463 bp

Genome Length

4993547 bp

Protein-coding Genes

4175 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyridoxamine 5'-phosphate oxidase family proteinDWX62_15895Not AvailableNegative3693750 - 369422618259.3
ribonuclease rDWX62_15900Not AvailableNegative3694386 - 369653081708.2
cation transporterDWX62_15905Not AvailablePositive3696757 - 369769534123.5
nad(p)-dependent oxidoreductaseDWX62_15910Not AvailablePositive3697757 - 369876438819.9
phosphatase pap2 family proteinDWX62_15915Not AvailablePositive3698755 - 369972037671.5
hypothetical proteinDWX62_15920Not AvailableNegative3699839 - 37000307019.54
trna dihydrouridine synthase dusbDWX62_15925Not AvailableNegative3700201 - 370118136673.6
u32 family peptidaseDWX62_15930Not AvailablePositive3701251 - 370254348560.4
acyl-coa thioesteraseDWX62_15935Not AvailablePositive3702575 - 370299115827.0
dna-protecting protein dpraDWX62_15940Not AvailablePositive3703003 - 370412140857.7

Displaying genes 3091 – 3100 of 4242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.