Bacteroides sp. AF20-13LB

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF20-13LB is characterized as a rod-shaped bacterium, which is typical for members of the Bacteroides genus. This organism possesses flagella, indicating that it has the capability for motility. The genetic makeup of Bacteroides sp. AF20-13LB is represented by a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and adaptation. The strain is cataloged under the accession number QTMH00000000.1, which provides a reference for researchers wishing to access its genomic information. The presence of flagella may enhance its ability to navigate its environment, which could be significant for its survival and function within various ecological niches, particularly in the human gut where Bacteroides species are commonly found. In terms of ecological insight, Bacteroides species, including AF20-13LB, play an essential role in the digestion of complex carbohydrates and contribute to the overall health of the gut microbiota. Their motility may allow them to effectively colonize and interact with other microbial communities, thereby influencing gut health and metabolism. Understanding the traits of Bacteroides sp. AF20-13LB may provide insights into its role within microbial ecosystems and its potential contributions to host health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF20-13LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF20-13LB AF20-13LB.Scaf45, whole genome shotgun

Gene Summary

Adenine Count

1362503 bp

Thymine Count

1316872 bp

Guanine Count

1128488 bp

Cytosine Count

1185463 bp

Genome Length

4993547 bp

Protein-coding Genes

4175 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
clindamycin resistance transfer factor btgaDWX62_14805Not AvailablePositive3434232 - 343481622278.9
clindamycin resistance transfer factor btgbDWX62_14810Not AvailablePositive3434821 - 343579537558.2
atp-binding proteinDWX62_14815Not AvailablePositive3435942 - 343716546429.1
hypothetical proteinDWX62_14820Not AvailablePositive3437186 - 343818738253.9
hypothetical proteinDWX62_14825Not AvailablePositive3438187 - 343893629461.7
gnat family n-acetyltransferaseDWX62_14840Not AvailableNegative3440413 - 344118629575.6
arac family transcriptional regulatorDWX62_14845Not AvailableNegative3441195 - 344203432803.2
mate family efflux transporterDWX62_14850Not AvailableNegative3442174 - 344355049803.8
hypothetical proteinDWX62_14855Not AvailableNegative3443883 - 34440867691.58
hypothetical proteinDWX62_14860Not AvailableNegative3444187 - 34443968128.24

Displaying genes 2881 – 2890 of 4242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.