Bacteroides sp. AF20-13LB

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF20-13LB is characterized as a rod-shaped bacterium, which is typical for members of the Bacteroides genus. This organism possesses flagella, indicating that it has the capability for motility. The genetic makeup of Bacteroides sp. AF20-13LB is represented by a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and adaptation. The strain is cataloged under the accession number QTMH00000000.1, which provides a reference for researchers wishing to access its genomic information. The presence of flagella may enhance its ability to navigate its environment, which could be significant for its survival and function within various ecological niches, particularly in the human gut where Bacteroides species are commonly found. In terms of ecological insight, Bacteroides species, including AF20-13LB, play an essential role in the digestion of complex carbohydrates and contribute to the overall health of the gut microbiota. Their motility may allow them to effectively colonize and interact with other microbial communities, thereby influencing gut health and metabolism. Understanding the traits of Bacteroides sp. AF20-13LB may provide insights into its role within microbial ecosystems and its potential contributions to host health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF20-13LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF20-13LB AF20-13LB.Scaf45, whole genome shotgun

Gene Summary

Adenine Count

1362503 bp

Thymine Count

1316872 bp

Guanine Count

1128488 bp

Cytosine Count

1185463 bp

Genome Length

4993547 bp

Protein-coding Genes

4175 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cytochrome ubiquinol oxidase subunit iDWX62_09505Not AvailableNegative2253313 - 225488758090.2
duf4492 domain-containing proteinDWX62_09510Not AvailableNegative2255004 - 22552258732.92
tolc family proteinDWX62_09515Not AvailablePositive2255436 - 225683651436.9
efflux rnd transporter periplasmic adaptor subunitDWX62_09520Not AvailablePositive2256849 - 225807843756.6
abc transporter atp-binding proteinDWX62_09525Not AvailablePositive2258094 - 225884027340.8
abc transporter permeaseDWX62_09530Not AvailablePositive2258901 - 226012143972.6
sensor histidine kinaseDWX62_09535Not AvailablePositive2260367 - 226143441165.1
dna-binding response regulatorDWX62_09540Not AvailablePositive2261431 - 226213227002.0
energy transducer tonbDWX62_09545Not AvailablePositive2262545 - 226323125544.0
pyridoxamine 5'-phosphate oxidaseDWX62_09550Not AvailablePositive2263548 - 226419224838.2

Displaying genes 1861 – 1870 of 4242 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.