Bacteroides sp. AF25-17LB

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF25-17LB is a rod-shaped bacterium characterized by the presence of flagella, which may facilitate motility in various environments. It possesses a single replicon, indicating a streamlined genetic organization. The genetic sequence of this strain is documented under the accession number QTMF00000000.1, which provides a basis for further genomic studies and comparisons with related species. As a member of the Bacteroides genus, this bacterium is likely to play a significant role in various ecological contexts, particularly within the gastrointestinal microbiota of animals, including humans. Bacteroides species are known for their ability to degrade complex carbohydrates, contributing to nutrient cycling and energy harvesting in their environments. The motility conferred by flagella may enhance its capacity to colonize different niches within the gut, potentially influencing the microbial community structure and metabolism. Understanding Bacteroides sp. AF25-17LB's traits can provide insights into its ecological functions and interactions within microbial communities. Its rod shape and motility may also allow it to adapt to changing conditions in the gut, highlighting the importance of such traits in microbial ecology and host health. Further research on this strain could elucidate its specific roles in digestion and its potential implications for health and disease.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF25-17LB
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF25-17LB AF25-17LB.Scaf61, whole genome shotgun

Gene Summary

Adenine Count

1290815 bp

Thymine Count

1262343 bp

Guanine Count

1080753 bp

Cytosine Count

1113564 bp

Genome Length

4747821 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf4886 domain-containing proteinDWY41_01155Not AvailableNegative265166 - 26701668585.1
glycoside hydrolase family 88 proteinDWY41_01160Not AvailableNegative267043 - 26959598742.7
ragb/susd family nutrient uptake outer membrane proteinDWY41_01165Not AvailableNegative269720 - 27133661577.0
susc/raga family tonb-linked outer membrane proteinDWY41_01170Not AvailableNegative271358 - 274597120557.0
fecr family proteinDWY41_01175Not AvailableNegative274699 - 27571839260.8
rna polymerase sigma-70 factorDWY41_01180Not AvailablePositive275872 - 27642021012.3
beta-glucosidaseDWY41_01185Not AvailableNegative276491 - 27870181747.0
hypothetical proteinDWY41_01190Not AvailableNegative278808 - 27957828278.9
beta-glucuronidaseDWY41_01195Not AvailableNegative279590 - 282310105129.0
glycoside hydrolase family 2DWY41_01200Not AvailableNegative282307 - 28410369263.8

Displaying genes 241 – 250 of 4015 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.