Bacteroides sp. AF25-18

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF25-18 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This organism contains a single replicon, indicating a streamlined genomic structure that can be advantageous for its adaptability and replication. The genomic information for Bacteroides sp. AF25-18 is available under the accession number QTME00000000.1. Bacteroides species are commonly found in the gastrointestinal tract of humans and other animals, where they play a critical role in the digestion of complex carbohydrates and the maintenance of gut health. The flagella may facilitate its movement within the gut environment, allowing it to colonize specific niches and interact with other microbial communities. The presence of a single replicon suggests that Bacteroides sp. AF25-18 may have a simplified genomic organization, which could enhance its efficiency in nutrient utilization and adaptation to varying conditions within the gut ecosystem. This adaptability is essential for surviving in the dynamic environment of the gastrointestinal tract, where competition for resources is intense. In summary, Bacteroides sp. AF25-18's rod shape, flagella presence, and single replicon are key traits that may contribute to its ecological role in the gut microbiome, particularly in nutrient degradation and microbial interactions. Understanding these traits can provide insights into the functionality and ecological significance of Bacteroides species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF25-18
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF25-18 AF25-18.Scaf93, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysine exporter lyso family proteinDWY42_15950Not AvailablePositive3896236 - 389685622139.5
abc transporter permeaseDWY42_15955Not AvailableNegative3897204 - 389844846862.5
pyridoxal phosphate-dependent aminotransferaseDWY42_15960Not AvailableNegative3898450 - 389965244955.1
fucose isomeraseDWY42_15965Not AvailablePositive3899818 - 390105346220.3
duf4494 domain-containing proteinDWY42_15970Not AvailablePositive3901149 - 390163118209.6
yggs family pyridoxal phosphate-dependent enzymeDWY42_15975Not AvailablePositive3901664 - 390233225401.4
dihydroorotate dehydrogenase-like proteinDWY42_15980Not AvailablePositive3902346 - 390332035560.3
long-chain fatty acid--coa ligaseDWY42_15985Not AvailablePositive3903510 - 390516862550.8
hypothetical proteinDWY42_15990Not AvailablePositive3905422 - 390680748577.1
duf3943 domain-containing proteinDWY42_15995Not AvailablePositive3906844 - 390831656284.2

Displaying genes 3091 – 3100 of 4760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.