Bacteroides sp. AF25-18

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF25-18 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This organism contains a single replicon, indicating a streamlined genomic structure that can be advantageous for its adaptability and replication. The genomic information for Bacteroides sp. AF25-18 is available under the accession number QTME00000000.1. Bacteroides species are commonly found in the gastrointestinal tract of humans and other animals, where they play a critical role in the digestion of complex carbohydrates and the maintenance of gut health. The flagella may facilitate its movement within the gut environment, allowing it to colonize specific niches and interact with other microbial communities. The presence of a single replicon suggests that Bacteroides sp. AF25-18 may have a simplified genomic organization, which could enhance its efficiency in nutrient utilization and adaptation to varying conditions within the gut ecosystem. This adaptability is essential for surviving in the dynamic environment of the gastrointestinal tract, where competition for resources is intense. In summary, Bacteroides sp. AF25-18's rod shape, flagella presence, and single replicon are key traits that may contribute to its ecological role in the gut microbiome, particularly in nutrient degradation and microbial interactions. Understanding these traits can provide insights into the functionality and ecological significance of Bacteroides species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF25-18
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF25-18 AF25-18.Scaf93, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent helicaseDWY42_11560Not AvailablePositive2832041 - 2835217122610.0
pd-(d/e)xk nuclease family proteinDWY42_11565Not AvailablePositive2835217 - 2838096110938.0
4-diphosphocytidyl-2c-methyl-d-erythritol kinaseDWY42_11570Not AvailableNegative2838171 - 283899830681.1
replicative dna helicaseDWY42_11575Not AvailablePositive2839260 - 284081657459.0
phenylalanine--trna ligase subunit betaDWY42_11580Not AvailablePositive2840970 - 284343291208.0
yebc/pmpr family dna-binding transcriptional regulatorDWY42_11585Not AvailablePositive2843466 - 284420627834.7
tigr03905 family tscpd domain-containing proteinDWY42_11590Not AvailablePositive2844208 - 28444539108.06
hypothetical proteinDWY42_11595Not AvailablePositive2844896 - 28451359196.84
hypothetical proteinDWY42_11600Not AvailablePositive2845605 - 28458027820.04
hlyd family efflux transporter periplasmic adaptor subunitDWY42_11605Not AvailablePositive2846004 - 284717044769.2

Displaying genes 2251 – 2260 of 4760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.