Bacteroides sp. AF25-18

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF25-18 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This organism contains a single replicon, indicating a streamlined genomic structure that can be advantageous for its adaptability and replication. The genomic information for Bacteroides sp. AF25-18 is available under the accession number QTME00000000.1. Bacteroides species are commonly found in the gastrointestinal tract of humans and other animals, where they play a critical role in the digestion of complex carbohydrates and the maintenance of gut health. The flagella may facilitate its movement within the gut environment, allowing it to colonize specific niches and interact with other microbial communities. The presence of a single replicon suggests that Bacteroides sp. AF25-18 may have a simplified genomic organization, which could enhance its efficiency in nutrient utilization and adaptation to varying conditions within the gut ecosystem. This adaptability is essential for surviving in the dynamic environment of the gastrointestinal tract, where competition for resources is intense. In summary, Bacteroides sp. AF25-18's rod shape, flagella presence, and single replicon are key traits that may contribute to its ecological role in the gut microbiome, particularly in nutrient degradation and microbial interactions. Understanding these traits can provide insights into the functionality and ecological significance of Bacteroides species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF25-18
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF25-18 AF25-18.Scaf93, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDWY42_11095Not AvailableNegative2725312 - 272652945981.8
dna gyrase subunit aDWY42_11100Not AvailableNegative2726560 - 272911896053.9
atp-dependent clp protease atp-binding subunitDWY42_11105Not AvailablePositive2729483 - 273199994055.0
molecular chaperone htpgDWY42_11110Not AvailablePositive2732134 - 273417978174.3
patatinDWY42_11115Not AvailablePositive2734309 - 273661887780.8
Trna-argNot AvailableNot AvailablePositive2736708 - 2736784Not Available
Trna-argNot AvailableNot AvailablePositive2736803 - 2736879Not Available
4-hydroxy-tetrahydrodipicolinate synthaseDWY42_11130Not AvailableNegative2737428 - 273832132818.2
nad-dependent dna ligase ligaDWY42_11135Not AvailableNegative2738423 - 274042075132.7
trna (guanosine(37)-n1)-methyltransferase trmdDWY42_11140Not AvailablePositive2740520 - 274119425453.7

Displaying genes 2161 – 2170 of 4760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.