Bacteroides sp. AF25-18

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF25-18 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This organism contains a single replicon, indicating a streamlined genomic structure that can be advantageous for its adaptability and replication. The genomic information for Bacteroides sp. AF25-18 is available under the accession number QTME00000000.1. Bacteroides species are commonly found in the gastrointestinal tract of humans and other animals, where they play a critical role in the digestion of complex carbohydrates and the maintenance of gut health. The flagella may facilitate its movement within the gut environment, allowing it to colonize specific niches and interact with other microbial communities. The presence of a single replicon suggests that Bacteroides sp. AF25-18 may have a simplified genomic organization, which could enhance its efficiency in nutrient utilization and adaptation to varying conditions within the gut ecosystem. This adaptability is essential for surviving in the dynamic environment of the gastrointestinal tract, where competition for resources is intense. In summary, Bacteroides sp. AF25-18's rod shape, flagella presence, and single replicon are key traits that may contribute to its ecological role in the gut microbiome, particularly in nutrient degradation and microbial interactions. Understanding these traits can provide insights into the functionality and ecological significance of Bacteroides species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF25-18
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF25-18 AF25-18.Scaf93, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
site-specific integraseDWY42_06520Not AvailablePositive1632330 - 163361050440.4
duf1016 family proteinDWY42_06525Not AvailablePositive1633677 - 163496949225.9
hypothetical proteinDWY42_06530Not AvailablePositive1634980 - 163599940630.0
duf3853 family proteinDWY42_06535Not AvailablePositive1636223 - 163653111129.7
mobilization proteinDWY42_06540Not AvailablePositive1636546 - 163762241097.6
dna primaseDWY42_06545Not AvailablePositive1637839 - 163879837009.0
mobilization proteinDWY42_06550Not AvailablePositive1639010 - 164041354761.7
steroid delta-isomeraseDWY42_06555Not AvailablePositive1640502 - 164085513706.5
lincosamide nucleotidyltransferase lnu(an2)DWY42_06560Not AvailableNegative1641303 - 164181519690.2
macrolide efflux mfs transporter mef(en2)DWY42_06565Not AvailableNegative1641840 - 164304544135.4

Displaying genes 1301 – 1310 of 4760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.