Bacteroides sp. AF25-18

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF25-18 is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This organism contains a single replicon, indicating a streamlined genomic structure that can be advantageous for its adaptability and replication. The genomic information for Bacteroides sp. AF25-18 is available under the accession number QTME00000000.1. Bacteroides species are commonly found in the gastrointestinal tract of humans and other animals, where they play a critical role in the digestion of complex carbohydrates and the maintenance of gut health. The flagella may facilitate its movement within the gut environment, allowing it to colonize specific niches and interact with other microbial communities. The presence of a single replicon suggests that Bacteroides sp. AF25-18 may have a simplified genomic organization, which could enhance its efficiency in nutrient utilization and adaptation to varying conditions within the gut ecosystem. This adaptability is essential for surviving in the dynamic environment of the gastrointestinal tract, where competition for resources is intense. In summary, Bacteroides sp. AF25-18's rod shape, flagella presence, and single replicon are key traits that may contribute to its ecological role in the gut microbiome, particularly in nutrient degradation and microbial interactions. Understanding these traits can provide insights into the functionality and ecological significance of Bacteroides species in their natural habitats.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF25-18
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF25-18 AF25-18.Scaf93, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-amino-4-deoxychorismate lyaseDWY42_05680Not AvailableNegative1433118 - 143371122693.3
aminodeoxychorismate synthase component iDWY42_05685Not AvailableNegative1433695 - 143467837481.9
hypothetical proteinDWY42_05690Not AvailableNegative1435020 - 143705377627.4
arabinan endo-1,5-alpha-l-arabinosidaseDWY42_05695Not AvailableNegative1437073 - 143807437462.1
1,4-beta-xylanaseDWY42_05700Not AvailableNegative1438071 - 143903937023.1
glycoside hydrolaseDWY42_05705Not AvailableNegative1439048 - 1441681101318.0
ragb/susd family nutrient uptake outer membrane proteinDWY42_05710Not AvailableNegative1441761 - 144335061771.0
tonb-dependent receptorDWY42_05715Not AvailableNegative1443372 - 1446371112102.0
hybrid sensor histidine kinase/response regulatorDWY42_05720Not AvailableNegative1446688 - 1450638152150.0
galactose mutarotaseDWY42_05725Not AvailableNegative1450821 - 145195442539.3

Displaying genes 1141 – 1150 of 4760 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.