Bacteroides sp. AF39-16AC

Rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides sp. AF39-16AC is a rod-shaped bacterium characterized by the presence of flagella, which may contribute to its motility. This species contains a single replicon, indicating a streamlined genetic organization that could influence its adaptability in various environments. The accession number for Bacteroides sp. AF39-16AC is QTLN00000000.1, which provides a reference point for researchers seeking genomic information about this organism. Bacteroides species are known for their role in the human gut microbiome, where they contribute to the digestion of complex carbohydrates and play a part in maintaining gut health. The presence of flagella in Bacteroides sp. AF39-16AC may allow for enhanced mobility within the microbial community, potentially enabling it to access nutrients more effectively or evade unfavorable conditions. This trait could facilitate its survival in the diverse environments of the gastrointestinal tract, where competition for resources is intense. In summary, Bacteroides sp. AF39-16AC exhibits key traits such as its rod shape, flagella, and a single replicon, which collectively suggest a well-adapted organism capable of thriving in complex microbial ecosystems. Its potential role in nutrient metabolism and interaction within the gut microbiome underscores the ecological importance of Bacteroides species in maintaining host health and microbial diversity.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides sp. AF39-16AC
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Bacteroides sp. AF39-16AC AF39-16AC.Scaf83, whole genome shotgun

Gene Summary

Adenine Count

1310604 bp

Thymine Count

1332302 bp

Guanine Count

1153963 bp

Cytosine Count

1120306 bp

Genome Length

4917973 bp

Protein-coding Genes

3951 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyrophosphataseDW039_04315Not AvailableNegative1054804 - 105514213058.4
d-tyrosyl-trna(tyr) deacylaseDW039_04320Not AvailableNegative1055142 - 105559416488.1
excinuclease abc subunit uvrcDW039_04325Not AvailableNegative1055675 - 105749570021.9
adenine phosphoribosyltransferaseDW039_04330Not AvailableNegative1057618 - 105814819669.0
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgDW039_04335Not AvailableNegative1058199 - 106007370022.7
tonb-dependent receptorDW039_04340Not AvailablePositive1060369 - 1063530116402.0
ragb/susd family nutrient uptake outer membrane proteinDW039_04345Not AvailablePositive1063550 - 106504055328.9
beta-galactosidaseDW039_04350Not AvailablePositive1065372 - 106718969254.1
hybrid sensor histidine kinase/response regulatorDW039_04355Not AvailablePositive1067295 - 1071248150598.0
tonb-dependent receptorDW039_04360Not AvailablePositive1071550 - 1074600113503.0

Displaying genes 861 – 870 of 4030 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.